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The Arabidopsis Gene Regulatory Information Server (AGRIS) is a information resource of Arabidopsis promoter sequences, transcription factors and their target genes. AGRIS currently contains two databases, AtcisDB (Arabidopsis thaliana cis-regulatory database) and AtTFDB (Arabidopsis thaliana transcription factor database). The two databases, used in tandem, provide a powerful tool for use in continuous research.

Soybean Knowledge Base (SoyKB), is a comprehensive all-inclusive web resource developed for soybean translational genomics and molecular breeding. SoyKB stores information about genes/proteins, miRNAs/sRNAs, metabolites, SNPs, plant introduction (PI lines) and traits. It handles the management and integration of soybean genomics and multi-omics data along with gene function annotations, biological pathway and trait information. It has many useful tools including gene family search, multiple gene/metabolite analysis, motif analysis tool, protein 3D structure viewer and data download and upload capacity. It has a user-friendly web interface together with genome browser and pathway viewer, which displays data in an intuitive manner to the soybean researchers, breeders and consumers. The QTLs, SNP, GWAS and traits information is seamlessly integrated in our newly developed suite of tools for the In Silico Breeding Program. It allows integration and extraction of the data in a tabular format as well as graphical visualization in our in-house Chromosome Visualizer. It also supports integration and visualization of Genotype by Sequencing (GBS) data for molecular breeding and phenotypic inferences. In addition, SoyKB now has capacity for incorporation of DNA methylation data and fast neutron mutation datasets. It is also linked seamlessly with P3DB for phosphorylation data. We have also incorporated suite of tools for differential expression analysis for microarray, transcriptomics RNA-seq, proteomics and metabolomics datasets. It includes access to gene lists, Venn diagrams, Volcano plots, functional annotations and pathway analysis. SoyKB is now powered by the iPlant Cyber-Infrastructure. The website is hosted on the iPlant’s advanced computing infrastructure established to leverage the data analysis capabilities.

The Northern California Earthquake Data Center (NCEDC) is an archive and distribution center for geophysical data relating to earthquakes in northern and central California.

Wikidata is a free and open knowledge base that can be read and edited by both humans and machines. Wikidata acts as central storage for the structured data of its Wikimedia sister projects including Wikipedia, Wikivoyage, Wiktionary, Wikisource, and others. Wikidata also provides support to many other sites and services beyond just Wikimedia projects. The content of Wikidata is available under a free license, exported using standard formats, and can be interlinked to other open data sets on the linked data web.

The mission of the National Institute on Drug Abuse (NIDA), part of the National Institutes of Health, is to advance science on the causes and consequences of drug use and addiction and to apply that knowledge to improve individual and public health. NIDA, in collaboration with other NIH Institutes, Centers, and Offices, and other federal partners, supports two large prospective developmental studies, the Adolescent Brain Cognitive Development SM (ABCD) Study and the HEALthy Brain and Child Development (HBCD) Study. The NIH Brain Development Cohorts (NBDC) Biorepository Portal serves two major purposes for the ABCD and HBCD studies: It facilitates the collection of samples by study staff, and it maintains a database of stored samples and sample associated metadata for the research community. Researchers can browse the inventory of available samples using the Biospecimen Explorer, and request biospecimens to conduct their own analyses. By providing these services, the NBDC Biorepository Portal aims to further support research on child and adolescent health and development.

The Database of Genotypes and Phenotypes (dbGaP) archives and distributes the results of studies that have investigated the interaction of genotype and phenotype. Such studies include genome-wide association studies, medical sequencing, molecular diagnostic assays, as well as association between genotype and non-clinical traits.