7,625 Data sources

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IBB PAS Repository

Institutional Repository Poland Compatibility:Not yet registeredPartners:PAU

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Plant Natural Antisense Transcripts Database
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequence
Ming Chen's Lab, Zhejiang University, Hangzhou, China
doi: 10.25504/fairsharing.rn1pxg
doi: 10.25504/fairsharing.rn1pxg
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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MODOMICS
Data Repository Poland Compatibility:Not yet registeredPartners:Bujnicki Lab, Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw (IIMCB), Warsaw, Poland Life Science, RNA sequence, ribonucleic acid
Bujnicki Lab, Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw (IIMCB), Warsaw, Poland
doi: 10.25504/fairsharing.3qh2tg
doi: 10.25504/fairsharing.3qh2tg
MODOMICS is the first comprehensive database system for biology of RNA modification. It integrates information about the chemical structure of modified nucleosides, their localization in RNA sequences, pathways of their biosynthesis and enzymes that carry out the respective reactions (together with their protein cofactors). Also included are the protein sequences, the structure data (if available), selected references from scientific literature, and links to other databases allowing to obtain comprehensive information about individual modified residues and proteins involved in their biosynthesis.
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Digital Commons @ SIA

Institutional Repository United States Compatibility:Not yet registeredPartners:Sotheby's Institute of Art

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Daemen Digital Commons

Institutional Repository United States Compatibility:Not yet registeredPartners:Daemen University, Daemen College

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CONTENTdm

Institutional Repository United States Compatibility:Not yet registeredPartners:Denison University

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YamBase
Data Repository United States Compatibility:Not yet registeredPartners:BTI Agriculture, Life Science, Plant Breeding
BTI
doi: 10.25504/fairsharing.koqxul
doi: 10.25504/fairsharing.koqxul
YamBase is a database containing breeding data for Yam (genus Dioscorea). Yam species that are being used for breeding include Dioscorea rotundata, Dioscorea cayenensis (both are native to Africa and the major cultivated species), Dioscorea aleata (native to Southeast Asia), and Dioscorea praehensilis, as well as several other species. YamBase contains phenotypic and genotypic data, as well as trial metadata from breeding programs in Africa.
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Registry of Open Data on AWS
Data Repository United States Compatibility:Not yet registeredPartners:Amazon Web Services, Inc. Humanities and Social Sciences, Life Sciences, Natural Sciences
Amazon Web Services, Inc.
re3data: r3d100010855
re3data: r3d100010855
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Tomato Functional Genomics Database
Data Repository United States Compatibility:Not yet registeredPartners:OSU Life Science, Expression data, RNA sequence
OSU
doi: 10.25504/fairsharing.dn2c0s
doi: 10.25504/fairsharing.dn2c0s
The Tomato Functional Genomics Database integrates several prior databases including the Tomato Expression Database and Tomato Metabolite Database, and the Tomato Small RNA Database.
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Database for Hydrological Time Series of Inland Waters
Data Repository Germany Compatibility:Not yet registeredPartners:DGFI-TUM Natural Sciences, Geophysics and Geodesy, Geodesy, Photogrammetry, Remote Sensing, Geoinformatics, Cartogaphy
DGFI-TUM
re3data: r3d100012166
re3data: r3d100012166
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7,625 Data sources

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IBB PAS Repository

Institutional Repository Poland Compatibility:Not yet registeredPartners:PAU

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Plant Natural Antisense Transcripts Database
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequence
Ming Chen's Lab, Zhejiang University, Hangzhou, China
doi: 10.25504/fairsharing.rn1pxg
doi: 10.25504/fairsharing.rn1pxg
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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MODOMICS
Data Repository Poland Compatibility:Not yet registeredPartners:Bujnicki Lab, Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw (IIMCB), Warsaw, Poland Life Science, RNA sequence, ribonucleic acid
Bujnicki Lab, Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw (IIMCB), Warsaw, Poland
doi: 10.25504/fairsharing.3qh2tg
doi: 10.25504/fairsharing.3qh2tg
MODOMICS is the first comprehensive database system for biology of RNA modification. It integrates information about the chemical structure of modified nucleosides, their localization in RNA sequences, pathways of their biosynthesis and enzymes that carry out the respective reactions (together with their protein cofactors). Also included are the protein sequences, the structure data (if available), selected references from scientific literature, and links to other databases allowing to obtain comprehensive information about individual modified residues and proteins involved in their biosynthesis.
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Digital Commons @ SIA

Institutional Repository United States Compatibility:Not yet registeredPartners:Sotheby's Institute of Art

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Daemen Digital Commons

Institutional Repository United States Compatibility:Not yet registeredPartners:Daemen University, Daemen College

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CONTENTdm

Institutional Repository United States Compatibility:Not yet registeredPartners:Denison University

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YamBase
Data Repository United States Compatibility:Not yet registeredPartners:BTI Agriculture, Life Science, Plant Breeding
BTI
doi: 10.25504/fairsharing.koqxul
doi: 10.25504/fairsharing.koqxul
YamBase is a database containing breeding data for Yam (genus Dioscorea). Yam species that are being used for breeding include Dioscorea rotundata, Dioscorea cayenensis (both are native to Africa and the major cultivated species), Dioscorea aleata (native to Southeast Asia), and Dioscorea praehensilis, as well as several other species. YamBase contains phenotypic and genotypic data, as well as trial metadata from breeding programs in Africa.
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Registry of Open Data on AWS
Data Repository United States Compatibility:Not yet registeredPartners:Amazon Web Services, Inc. Humanities and Social Sciences, Life Sciences, Natural Sciences
Amazon Web Services, Inc.
re3data: r3d100010855
re3data: r3d100010855
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Tomato Functional Genomics Database
Data Repository United States Compatibility:Not yet registeredPartners:OSU Life Science, Expression data, RNA sequence
OSU
doi: 10.25504/fairsharing.dn2c0s
doi: 10.25504/fairsharing.dn2c0s
The Tomato Functional Genomics Database integrates several prior databases including the Tomato Expression Database and Tomato Metabolite Database, and the Tomato Small RNA Database.
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Database for Hydrological Time Series of Inland Waters
Data Repository Germany Compatibility:Not yet registeredPartners:DGFI-TUM Natural Sciences, Geophysics and Geodesy, Geodesy, Photogrammetry, Remote Sensing, Geoinformatics, Cartogaphy
DGFI-TUM
re3data: r3d100012166
re3data: r3d100012166
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IBB PAS Repository

Plant Natural Antisense Transcripts Database

MODOMICS

Digital Commons @ SIA

Daemen Digital Commons

CONTENTdm

YamBase

Registry of Open Data on AWS

Tomato Functional Genomics Database

Database for Hydrological Time Series of Inland Waters

IBB PAS Repository

Plant Natural Antisense Transcripts Database

MODOMICS

Digital Commons @ SIA

Daemen Digital Commons

CONTENTdm

YamBase

Registry of Open Data on AWS

Tomato Functional Genomics Database

Database for Hydrological Time Series of Inland Waters

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