6,212 Data sources

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Plant Natural Antisense Transcripts Database
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequence
Ming Chen's Lab, Zhejiang University, Hangzhou, China
doi: 10.25504/fairsharing.rn1pxg
doi: 10.25504/fairsharing.rn1pxg
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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National Freshwater Genetic Resource Center
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAFS, NSTI Life Sciences, Basic Biological and Medical Research, Cell Biology
CAFS,
NSTI
re3data: r3d100013765
re3data: r3d100013765
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National Omics Data Encyclopedia
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAS Key Laboratory of Computational Biology, Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences Life Science, Metabolomics, Metagenomics
CAS Key Laboratory of Computational Biology, Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences
doi: 10.25504/fairsharing.eivzjw
re3data: r3d100013758
doi: 10.25504/fairsharing.eivzjw
re3data: r3d100013758
NODE (The National Omics Data Encyclopedia) provides an integrated, compatible, comparable, and scalable multi-omics resource platform that supports flexible data management and effective data release. NODE uses a hierarchical data architecture to support storage of muti-omics data including sequencing data, MS based proteomics data, MS or NMR based metabolomics data, and fluorescence imaging data. Launched in early 2017, NODE has collected and published over 900 terabytes of omics data for researchers from China and all over the world in last three years, 22% of which contains multiple omics data. NODE provides functions around the whole life cycle of omics data, from data archive, data requests/responses to data sharing, data analysis, data review and publish.
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Western University Dataverse
Data Repository Canada, United States Compatibility:Not yet registeredPartners:Western University, Western Libraries, Western University, Social Science Technology Services, Dataverse, IQSS, OCUL Humanities and Social Sciences, Humanities, Life Sciences
Western University, Western Libraries,
Western University, Social Science Technology Services,
Dataverse,
IQSS,
OCUL
re3data: r3d100012809
re3data: r3d100012809
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Eukaryotic Paralog Group Database
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUCKOO Life Science, deoxyribonucleic acid, gene
CUCKOO
doi: 10.25504/fairsharing.yp3rcg
doi: 10.25504/fairsharing.yp3rcg
The database is gene-centered and organized by paralog family. It focused on the paralogs and the duplication events in the evolution. The paralog families and paralogons can be searched by text or sequence, and are downloadable from the website in plain text files.
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UA Institutional Repository

Institutional Repository United States Compatibility:Not yet registeredPartners:AAMU

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Cacao Genome Database
Data Repository United States Compatibility:Not yet registeredPartners:MainLab Bioinformatics, Washington State University, USA Agriculture, Plant Genetics, Plant Breeding
MainLab Bioinformatics, Washington State University, USA
doi: 10.25504/fairsharing.d040a4
doi: 10.25504/fairsharing.d040a4
The Cacao Genome Database (CGD) is a database storing information on the genome of Theobroma cacao. The sequenced genotype, Matina 1-6, is representative of the genetic background most commonly found in the cacao producing countries, enabling results to be applied to current commercial cultivars. Before viewing the data, users have to agree that they will not seek any intellectual property protection over the data, including gene sequences contained in the database. The Information Access Agreement allows any cacao breeders and other researchers to freely use the genome information to develop new cacao varieties. This allows for a level playing field and a healthy competitive environment that will ultimately benefit the sustainability of cacao production in the long term.
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Sunshine Coast Regional District Open Data
Data Repository Canada Compatibility:Not yet registeredPartners:SCRD Natural Sciences, Atmospheric Science and Oceanography, Geography
SCRD
re3data: r3d100013019
re3data: r3d100013019
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UF Law Scholarship Repository

Institutional Repository United States Compatibility:Not yet registeredPartners:University of Florida Levin College of Law

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Auburn University Digital Collections

Institutional Repository United States Compatibility:Not yet registeredPartners:AU

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6,212 Data sources

file_uploadGo to repository
Plant Natural Antisense Transcripts Database
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequence
Ming Chen's Lab, Zhejiang University, Hangzhou, China
doi: 10.25504/fairsharing.rn1pxg
doi: 10.25504/fairsharing.rn1pxg
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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National Freshwater Genetic Resource Center
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAFS, NSTI Life Sciences, Basic Biological and Medical Research, Cell Biology
CAFS,
NSTI
re3data: r3d100013765
re3data: r3d100013765
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National Omics Data Encyclopedia
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAS Key Laboratory of Computational Biology, Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences Life Science, Metabolomics, Metagenomics
CAS Key Laboratory of Computational Biology, Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences
doi: 10.25504/fairsharing.eivzjw
re3data: r3d100013758
doi: 10.25504/fairsharing.eivzjw
re3data: r3d100013758
NODE (The National Omics Data Encyclopedia) provides an integrated, compatible, comparable, and scalable multi-omics resource platform that supports flexible data management and effective data release. NODE uses a hierarchical data architecture to support storage of muti-omics data including sequencing data, MS based proteomics data, MS or NMR based metabolomics data, and fluorescence imaging data. Launched in early 2017, NODE has collected and published over 900 terabytes of omics data for researchers from China and all over the world in last three years, 22% of which contains multiple omics data. NODE provides functions around the whole life cycle of omics data, from data archive, data requests/responses to data sharing, data analysis, data review and publish.
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Western University Dataverse
Data Repository Canada, United States Compatibility:Not yet registeredPartners:Western University, Western Libraries, Western University, Social Science Technology Services, Dataverse, IQSS, OCUL Humanities and Social Sciences, Humanities, Life Sciences
Western University, Western Libraries,
Western University, Social Science Technology Services,
Dataverse,
IQSS,
OCUL
re3data: r3d100012809
re3data: r3d100012809
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Eukaryotic Paralog Group Database
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUCKOO Life Science, deoxyribonucleic acid, gene
CUCKOO
doi: 10.25504/fairsharing.yp3rcg
doi: 10.25504/fairsharing.yp3rcg
The database is gene-centered and organized by paralog family. It focused on the paralogs and the duplication events in the evolution. The paralog families and paralogons can be searched by text or sequence, and are downloadable from the website in plain text files.
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UA Institutional Repository

Institutional Repository United States Compatibility:Not yet registeredPartners:AAMU

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Cacao Genome Database
Data Repository United States Compatibility:Not yet registeredPartners:MainLab Bioinformatics, Washington State University, USA Agriculture, Plant Genetics, Plant Breeding
MainLab Bioinformatics, Washington State University, USA
doi: 10.25504/fairsharing.d040a4
doi: 10.25504/fairsharing.d040a4
The Cacao Genome Database (CGD) is a database storing information on the genome of Theobroma cacao. The sequenced genotype, Matina 1-6, is representative of the genetic background most commonly found in the cacao producing countries, enabling results to be applied to current commercial cultivars. Before viewing the data, users have to agree that they will not seek any intellectual property protection over the data, including gene sequences contained in the database. The Information Access Agreement allows any cacao breeders and other researchers to freely use the genome information to develop new cacao varieties. This allows for a level playing field and a healthy competitive environment that will ultimately benefit the sustainability of cacao production in the long term.
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Sunshine Coast Regional District Open Data
Data Repository Canada Compatibility:Not yet registeredPartners:SCRD Natural Sciences, Atmospheric Science and Oceanography, Geography
SCRD
re3data: r3d100013019
re3data: r3d100013019
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UF Law Scholarship Repository

Institutional Repository United States Compatibility:Not yet registeredPartners:University of Florida Levin College of Law

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Auburn University Digital Collections

Institutional Repository United States Compatibility:Not yet registeredPartners:AU

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US
NL
CN
CA
SG
HK
Thematic: No

Plant Natural Antisense Transcripts Database

National Freshwater Genetic Resource Center

National Omics Data Encyclopedia

Western University Dataverse

Eukaryotic Paralog Group Database

UA Institutional Repository

Cacao Genome Database

Sunshine Coast Regional District Open Data

UF Law Scholarship Repository

Auburn University Digital Collections

Plant Natural Antisense Transcripts Database

National Freshwater Genetic Resource Center

National Omics Data Encyclopedia

Western University Dataverse

Eukaryotic Paralog Group Database

UA Institutional Repository

Cacao Genome Database

Sunshine Coast Regional District Open Data

UF Law Scholarship Repository

Auburn University Digital Collections

Filters

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US close NL close CN close CA close SG close HK closeThematic: No close

US
NL
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HK
Thematic: No