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- Data Repository Finland, Norway Compatibility:Not yet registeredPartners:VTT , University of Bergen Molecular Dynamics, Structure, lipidVTT ,University of Bergen
The NMRlipids Project is an open collaboration focused on understanding lipid systems at an atomistic level. This collaborative effort occurs through a blog (nmrlipids.blogspot.fi) and github (github.com/NMRlipids); it involves detailed exploration of lipid structures and interactions through all-atom Molecular Dynamics (MD) simulations, using Nuclear Magnetic Resonance (NMR) and other high-fidelity experimental data as a benchmark. The project aims to enhance the understanding of lipid behavior in biological systems, contributing significantly to the fields of biochemistry and molecular biology.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Norway Compatibility:OpenAIRE 3.0 (OA, funding)Partners:CICERO Earth and Planetary SciencesCICEROOAI-PMH URL: https://pub.cicero.oslo.no/cicero-oai/openaire
This site provides access to the research output of the institution. The interface is available in Norwegian and English.
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For further information contact us at helpdesk@openaire.eu - Data Repository Singapore Compatibility:Not yet registeredPartners:EOS, World Organisation of Volcano Observatories Meteorology, Earth Science, observation designEOS,World Organisation of Volcano Observatories
re3data: r3d100013649
WOVOdat is a comprehensive global database on volcanic unrest aimed at understanding pre-eruptive processes and improving eruption forecasts. WOVOdat is brought to you by WOVO (World Organization of Volcano Observatories) and presently hosted at the Earth Observatory of Singapore.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Norway Compatibility:OpenAIRE 3.0 (OA, funding)Partners:Innlandet Hospital TrustInnlandet Hospital TrustOAI-PMH URL: https://sihf.brage.unit.no/sihf-oai/openaire
This is an institutional repository of the Sykehuset Innlandet HF (Innlandet Hospital Trust). Users may setup RSS feeds to be alerted to new content. The interface is available in Norwegian and English.
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For further information contact us at helpdesk@openaire.eu - Data Repository Singapore Compatibility:Not yet registeredPartners:Evolution of Protein Structure and Function Group, Biomolecular Modelling and Design Division, Bioinformatics Institute, Singapore Life Science, Multiple sequence alignment, molecular_functionEvolution of Protein Structure and Function Group, Biomolecular Modelling and Design Division, Bioinformatics Institute, Singapore
Detection of functional divergence in human protein families. Cube-DB is a database of pre-evaluated conservation and specialization scores for residues in paralogous proteins belonging to multi-member families of human proteins. Protein family classification follows (largely) the classification suggested by HUGO Gene Nomenclature Committee. Sets of orthologous protein sequences were generated by mutual-best-hit strategy using full vertebrate genomes available in Ensembl. The scores, described on documentation page, are assigned to each individual residue in a protein, and presented in the form of a table (html or downloadable xls formats) and mapped, when appropriate, onto the related structure (Jmol, Pymol, Chimera).
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Norway Compatibility:OpenAIRE 3.0 (OA, funding)Partners:USN MultidisciplinaryUSNOAI-PMH URL: https://openarchive.usn.no/usn-oai/openaire
This site provides access to the research output of the University College of Southeast Norway. Interface is available in English and Norwegian, most of the content is in Norwegian.
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For further information contact us at helpdesk@openaire.eu - Data Repository Singapore Compatibility:Not yet registeredPartners:BII Life Science, signaling, proteinBII
The AlloMAPS database provides data on the energetics of communication in proteins with well-documented allosteric regulation, allosteric signalling in PDBselect chains, and allosteric effects of mutations. In addition to energetics of allosteric signaling between known functional and regulatory sites, allosteric modulation caused by the binding to these sites, by SNPs, and by mutations designated by the user can be explored. Allosteric Signaling Maps (ASMs), which are produced via the exhaustive computational scanning for stabilizing and destabilizing mutations and for the modulation range caused by the sequence position are available for each protein/protein chain in the database.
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- Data Repository Finland, Norway Compatibility:Not yet registeredPartners:VTT , University of Bergen Molecular Dynamics, Structure, lipidVTT ,University of Bergen
The NMRlipids Project is an open collaboration focused on understanding lipid systems at an atomistic level. This collaborative effort occurs through a blog (nmrlipids.blogspot.fi) and github (github.com/NMRlipids); it involves detailed exploration of lipid structures and interactions through all-atom Molecular Dynamics (MD) simulations, using Nuclear Magnetic Resonance (NMR) and other high-fidelity experimental data as a benchmark. The project aims to enhance the understanding of lipid behavior in biological systems, contributing significantly to the fields of biochemistry and molecular biology.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Norway Compatibility:OpenAIRE 3.0 (OA, funding)Partners:CICERO Earth and Planetary SciencesCICEROOAI-PMH URL: https://pub.cicero.oslo.no/cicero-oai/openaire
This site provides access to the research output of the institution. The interface is available in Norwegian and English.
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For further information contact us at helpdesk@openaire.eu - Data Repository Singapore Compatibility:Not yet registeredPartners:EOS, World Organisation of Volcano Observatories Meteorology, Earth Science, observation designEOS,World Organisation of Volcano Observatories
re3data: r3d100013649
WOVOdat is a comprehensive global database on volcanic unrest aimed at understanding pre-eruptive processes and improving eruption forecasts. WOVOdat is brought to you by WOVO (World Organization of Volcano Observatories) and presently hosted at the Earth Observatory of Singapore.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Norway Compatibility:OpenAIRE 3.0 (OA, funding)Partners:Innlandet Hospital TrustInnlandet Hospital TrustOAI-PMH URL: https://sihf.brage.unit.no/sihf-oai/openaire
This is an institutional repository of the Sykehuset Innlandet HF (Innlandet Hospital Trust). Users may setup RSS feeds to be alerted to new content. The interface is available in Norwegian and English.
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For further information contact us at helpdesk@openaire.eu - Data Repository Singapore Compatibility:Not yet registeredPartners:Evolution of Protein Structure and Function Group, Biomolecular Modelling and Design Division, Bioinformatics Institute, Singapore Life Science, Multiple sequence alignment, molecular_functionEvolution of Protein Structure and Function Group, Biomolecular Modelling and Design Division, Bioinformatics Institute, Singapore
Detection of functional divergence in human protein families. Cube-DB is a database of pre-evaluated conservation and specialization scores for residues in paralogous proteins belonging to multi-member families of human proteins. Protein family classification follows (largely) the classification suggested by HUGO Gene Nomenclature Committee. Sets of orthologous protein sequences were generated by mutual-best-hit strategy using full vertebrate genomes available in Ensembl. The scores, described on documentation page, are assigned to each individual residue in a protein, and presented in the form of a table (html or downloadable xls formats) and mapped, when appropriate, onto the related structure (Jmol, Pymol, Chimera).
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Norway Compatibility:OpenAIRE 3.0 (OA, funding)Partners:USN MultidisciplinaryUSNOAI-PMH URL: https://openarchive.usn.no/usn-oai/openaire
This site provides access to the research output of the University College of Southeast Norway. Interface is available in English and Norwegian, most of the content is in Norwegian.
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For further information contact us at helpdesk@openaire.eu - Data Repository Singapore Compatibility:Not yet registeredPartners:BII Life Science, signaling, proteinBII
The AlloMAPS database provides data on the energetics of communication in proteins with well-documented allosteric regulation, allosteric signalling in PDBselect chains, and allosteric effects of mutations. In addition to energetics of allosteric signaling between known functional and regulatory sites, allosteric modulation caused by the binding to these sites, by SNPs, and by mutations designated by the user can be explored. Allosteric Signaling Maps (ASMs), which are produced via the exhaustive computational scanning for stabilizing and destabilizing mutations and for the modulation range caused by the sequence position are available for each protein/protein chain in the database.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Norway Compatibility:OpenAIRE 3.0 (OA, funding)Partners:HiOA MultidisciplinaryHiOAOAI-PMH URL: https://oda.oslomet.no/oda-oai/openaire
This site provides access to the output of the institution. The interface is available in Norwegian and English. Users may set up RSS feeds to be alerted to new content.
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