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- Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequenceMing Chen's Lab, Zhejiang University, Hangzhou, China
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAFS, NSTI Life Sciences, Basic Biological and Medical Research, Cell BiologyCAFS,NSTI
re3data: r3d100013765
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAS Key Laboratory of Computational Biology, Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences Life Science, Metabolomics, MetagenomicsCAS Key Laboratory of Computational Biology, Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences
re3data: r3d100013758
NODE (The National Omics Data Encyclopedia) provides an integrated, compatible, comparable, and scalable multi-omics resource platform that supports flexible data management and effective data release. NODE uses a hierarchical data architecture to support storage of muti-omics data including sequencing data, MS based proteomics data, MS or NMR based metabolomics data, and fluorescence imaging data. Launched in early 2017, NODE has collected and published over 900 terabytes of omics data for researchers from China and all over the world in last three years, 22% of which contains multiple omics data. NODE provides functions around the whole life cycle of omics data, from data archive, data requests/responses to data sharing, data analysis, data review and publish.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUCKOO Life Science, deoxyribonucleic acid, geneCUCKOO
The database is gene-centered and organized by paralog family. It focused on the paralogs and the duplication events in the evolution. The paralog families and paralogons can be searched by text or sequence, and are downloadable from the website in plain text files.
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For further information contact us at helpdesk@openaire.eu - Data Repository Italy Compatibility:Not yet registeredPartners:EURAC Linguistics, Humanities and Social Science, Applied LinguisticsEURAC
re3data: r3d100012860
The Eurac Research CLARIN Centre (ERCC) is a dedicated repository for language data. It is hosted by the Institute for Applied Linguistics (IAL) at Eurac Research, a private research centre based in Bolzano, South Tyrol, Italy. The Centre is part of the Europe-wide CLARIN infrastructure, which means that it follows well-defined international standards for (meta)data and procedures and is well-embedded in the wider European Linguistics infrastructure. The repository hosts data collected at the IAL, but is also open for data deposits from external collaborators.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Poland Compatibility:Not yet registeredPartners:West Pomeranian University of Technology in SzczecinWest Pomeranian University of Technology in SzczecinAll Research products
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Italy Compatibility:OpenAIRE PubRepos v4.0Partners:University of Cagliari MultidisciplinaryUniversity of CagliariOAI-PMH URL: https://iris.unica.it/oai/openaire4
This site provides access to the research output of the institution. The interface is available in Italian and English. Some content is not available as full-text.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:澳門大學 (Universidade de Macau)澳門大學 (Universidade de Macau)All Research products
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:WMC Biomedical Science, mutation analysis, mutationWMC
mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different methods and population variation data. The database has the following functions: (i) browse and search the background DNMRs of each gene predicted by four different methods, including GC content (DNMR-GC), sequence context (DNMR-SC), multiple factors (DNMR-MF) and local DNA methylation level (DNMR-DM); (ii) search variant frequencies in publicly available databases, including ExAC, ESP6500, UK10K, 1000G and dbSNP and (iii) investigate the DNM burden to prioritize candidate genes based on the four background DNMRs using three statistical methods (TADA, Binomial and Poisson test). In conclusion, mirDNMR can be widely used to identify the genetic basis of sporadic genetic diseases.
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- Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequenceMing Chen's Lab, Zhejiang University, Hangzhou, China
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAFS, NSTI Life Sciences, Basic Biological and Medical Research, Cell BiologyCAFS,NSTI
re3data: r3d100013765
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAS Key Laboratory of Computational Biology, Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences Life Science, Metabolomics, MetagenomicsCAS Key Laboratory of Computational Biology, Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences
re3data: r3d100013758
NODE (The National Omics Data Encyclopedia) provides an integrated, compatible, comparable, and scalable multi-omics resource platform that supports flexible data management and effective data release. NODE uses a hierarchical data architecture to support storage of muti-omics data including sequencing data, MS based proteomics data, MS or NMR based metabolomics data, and fluorescence imaging data. Launched in early 2017, NODE has collected and published over 900 terabytes of omics data for researchers from China and all over the world in last three years, 22% of which contains multiple omics data. NODE provides functions around the whole life cycle of omics data, from data archive, data requests/responses to data sharing, data analysis, data review and publish.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUCKOO Life Science, deoxyribonucleic acid, geneCUCKOO
The database is gene-centered and organized by paralog family. It focused on the paralogs and the duplication events in the evolution. The paralog families and paralogons can be searched by text or sequence, and are downloadable from the website in plain text files.
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For further information contact us at helpdesk@openaire.eu - Data Repository Italy Compatibility:Not yet registeredPartners:EURAC Linguistics, Humanities and Social Science, Applied LinguisticsEURAC
re3data: r3d100012860
The Eurac Research CLARIN Centre (ERCC) is a dedicated repository for language data. It is hosted by the Institute for Applied Linguistics (IAL) at Eurac Research, a private research centre based in Bolzano, South Tyrol, Italy. The Centre is part of the Europe-wide CLARIN infrastructure, which means that it follows well-defined international standards for (meta)data and procedures and is well-embedded in the wider European Linguistics infrastructure. The repository hosts data collected at the IAL, but is also open for data deposits from external collaborators.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Italy Compatibility:OpenAIRE PubRepos v4.0Partners:University of Cagliari MultidisciplinaryUniversity of CagliariOAI-PMH URL: https://iris.unica.it/oai/openaire4
This site provides access to the research output of the institution. The interface is available in Italian and English. Some content is not available as full-text.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:WMC Biomedical Science, mutation analysis, mutationWMC
mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different methods and population variation data. The database has the following functions: (i) browse and search the background DNMRs of each gene predicted by four different methods, including GC content (DNMR-GC), sequence context (DNMR-SC), multiple factors (DNMR-MF) and local DNA methylation level (DNMR-DM); (ii) search variant frequencies in publicly available databases, including ExAC, ESP6500, UK10K, 1000G and dbSNP and (iii) investigate the DNM burden to prioritize candidate genes based on the four background DNMRs using three statistical methods (TADA, Binomial and Poisson test). In conclusion, mirDNMR can be widely used to identify the genetic basis of sporadic genetic diseases.
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