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PHAIDRA - repository of the University of Vienna

Institutional Repository Austria Compatibility:Not yet registeredPartners:University of Vienna

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Institutional Knowledge at Singapore Management University

Institutional Repository Singapore Compatibility:Not yet registeredPartners:SMU

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Fluorophores.org

Institutional Repository Austria Compatibility:Not yet registeredPartners:SG3 Knowledge Network OG

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NCBI dbMHC
Data Repository United States, Pakistan, Austria Compatibility:Not yet registeredPartners:NCBI, NIH, NLM, Medical University of Graz, HHSD Life Sciences, Microbiology, Virology and Immunology, Immunology
NCBI,
NIH,
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re3data: r3d100010881
re3data: r3d100010881
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SIT Institutional Research Repository

Institutional Repository Singapore Compatibility:Not yet registeredPartners:SIT

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Publication Database of the Vienna University of Technology

Institutional Repository Austria Compatibility:Not yet registeredPartners:TUW

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Gene Expression Nervous System Atlas
Data Repository United States, Pakistan Compatibility:Not yet registeredPartners:NINDS, NIH, Rockefeller University Life Sciences, Basic Biological and Medical Research, Zoology
NINDS,
NIH,
Rockefeller University
re3data: r3d100010932
re3data: r3d100010932
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Elektronisches Publikationsportal der Österreichischen Akademie der Wissenschaften
Institutional Repository Austria Compatibility:OpenAIRE 2.0+ (DRIVER OA, EC funding)Partners:OAW Multidisciplinary, Biology and Biochemistry, Mathematics and Statistics
OAW
OAI-PMH URL: http://epub.oeaw.ac.at/oai
This site is a repository providing access to the publication output of the organisation. Not all items are available with open access, but those that are can be found easily by checking the Open Access check box. The main site interface is available in English or German, however the supporting information and help is in the latter only.
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IRIHS - Institutional Repository at IHS
Institutional Repository Austria Compatibility:OpenAIRE PubRepos v4.0Partners:Institut für Höhere Studien, Wien - Institute for Advanced Studies, Vienna Multidisciplinary
Institut für Höhere Studien, Wien - Institute for Advanced Studies, Vienna
OAI-PMH URL: https://irihs.ihs.ac.at/cgi/oai2
IRIHS is a digital archive of research and enterprise output produced by the Institute for Advanced Studies.
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probeBase
Data Repository Austria Compatibility:Not yet registeredPartners:University of Vienna, Department of Microbiology and Ecosystem Science, Austria Life Science, Microbiology, PCR primers
University of Vienna, Department of Microbiology and Ecosystem Science, Austria
doi: 10.25504/fairsharing.t6wjn7
doi: 10.25504/fairsharing.t6wjn7
probeBase is a manually maintained and curated database of rRNA-targeted oligonucleotide probes and primers. Contextual information and multiple options for evaluating in silico hybridization performance against the most recent rRNA sequence databases are provided for each oligonucleotide entry, which makes probeBase an important and frequently used resource for microbiology research and diagnostics. The major features of probeBase include a classification of probes and primers according to the NCBI taxonomy database, a powerful and customizable search function, which serves to query for target organisms, probe names, primers, target sites, and references. The probeBase match tool can be used to match near-full length rRNA sequences against probeBase and find all published probes targeting the query sequences. The new proxy match tool extends this analysis to partial rRNA sequences, which exploits full-length sequences in the rRNA sequence database SILVA to find published probes potentially targeting partial query sequences. A tool for submitting new or missing probe sequences or references helps to keep probeBase up-to-date.
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805 Data sources

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PHAIDRA - repository of the University of Vienna

Institutional Repository Austria Compatibility:Not yet registeredPartners:University of Vienna

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Institutional Knowledge at Singapore Management University

Institutional Repository Singapore Compatibility:Not yet registeredPartners:SMU

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Fluorophores.org

Institutional Repository Austria Compatibility:Not yet registeredPartners:SG3 Knowledge Network OG

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NCBI dbMHC
Data Repository United States, Pakistan, Austria Compatibility:Not yet registeredPartners:NCBI, NIH, NLM, Medical University of Graz, HHSD Life Sciences, Microbiology, Virology and Immunology, Immunology
NCBI,
NIH,
NLM,
Medical University of Graz,
HHSD
re3data: r3d100010881
re3data: r3d100010881
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SIT Institutional Research Repository

Institutional Repository Singapore Compatibility:Not yet registeredPartners:SIT

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Publication Database of the Vienna University of Technology

Institutional Repository Austria Compatibility:Not yet registeredPartners:TUW

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Gene Expression Nervous System Atlas
Data Repository United States, Pakistan Compatibility:Not yet registeredPartners:NINDS, NIH, Rockefeller University Life Sciences, Basic Biological and Medical Research, Zoology
NINDS,
NIH,
Rockefeller University
re3data: r3d100010932
re3data: r3d100010932
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Elektronisches Publikationsportal der Österreichischen Akademie der Wissenschaften
Institutional Repository Austria Compatibility:OpenAIRE 2.0+ (DRIVER OA, EC funding)Partners:OAW Multidisciplinary, Biology and Biochemistry, Mathematics and Statistics
OAW
OAI-PMH URL: http://epub.oeaw.ac.at/oai
This site is a repository providing access to the publication output of the organisation. Not all items are available with open access, but those that are can be found easily by checking the Open Access check box. The main site interface is available in English or German, however the supporting information and help is in the latter only.
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IRIHS - Institutional Repository at IHS
Institutional Repository Austria Compatibility:OpenAIRE PubRepos v4.0Partners:Institut für Höhere Studien, Wien - Institute for Advanced Studies, Vienna Multidisciplinary
Institut für Höhere Studien, Wien - Institute for Advanced Studies, Vienna
OAI-PMH URL: https://irihs.ihs.ac.at/cgi/oai2
IRIHS is a digital archive of research and enterprise output produced by the Institute for Advanced Studies.
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probeBase
Data Repository Austria Compatibility:Not yet registeredPartners:University of Vienna, Department of Microbiology and Ecosystem Science, Austria Life Science, Microbiology, PCR primers
University of Vienna, Department of Microbiology and Ecosystem Science, Austria
doi: 10.25504/fairsharing.t6wjn7
doi: 10.25504/fairsharing.t6wjn7
probeBase is a manually maintained and curated database of rRNA-targeted oligonucleotide probes and primers. Contextual information and multiple options for evaluating in silico hybridization performance against the most recent rRNA sequence databases are provided for each oligonucleotide entry, which makes probeBase an important and frequently used resource for microbiology research and diagnostics. The major features of probeBase include a classification of probes and primers according to the NCBI taxonomy database, a powerful and customizable search function, which serves to query for target organisms, probe names, primers, target sites, and references. The probeBase match tool can be used to match near-full length rRNA sequences against probeBase and find all published probes targeting the query sequences. The new proxy match tool extends this analysis to partial rRNA sequences, which exploits full-length sequences in the rRNA sequence database SILVA to find published probes potentially targeting partial query sequences. A tool for submitting new or missing probe sequences or references helps to keep probeBase up-to-date.
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SG
PK
AT
Thematic: No

PHAIDRA - repository of the University of Vienna

Institutional Knowledge at Singapore Management University

Fluorophores.org

NCBI dbMHC

SIT Institutional Research Repository

Publication Database of the Vienna University of Technology

Gene Expression Nervous System Atlas

Elektronisches Publikationsportal der Österreichischen Akademie der Wissenschaften

IRIHS - Institutional Repository at IHS

probeBase

PHAIDRA - repository of the University of Vienna

Institutional Knowledge at Singapore Management University

Fluorophores.org

NCBI dbMHC

SIT Institutional Research Repository

Publication Database of the Vienna University of Technology

Gene Expression Nervous System Atlas

Elektronisches Publikationsportal der Österreichischen Akademie der Wissenschaften

IRIHS - Institutional Repository at IHS

probeBase

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SG
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