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- Data Repository Singapore Compatibility:Not yet registeredPartners:BII Life Science, signaling, proteinBII
The AlloMAPS database provides data on the energetics of communication in proteins with well-documented allosteric regulation, allosteric signalling in PDBselect chains, and allosteric effects of mutations. In addition to energetics of allosteric signaling between known functional and regulatory sites, allosteric modulation caused by the binding to these sites, by SNPs, and by mutations designated by the user can be explored. Allosteric Signaling Maps (ASMs), which are produced via the exhaustive computational scanning for stabilizing and destabilizing mutations and for the modulation range caused by the sequence position are available for each protein/protein chain in the database.
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:Erfgoed centrum Zutphen Humanities and Social Sciences, History, HumanitiesErfgoed centrum Zutphen
re3data: r3d100013336
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:OpenAIRE CRIS v1.1Partners:Breda University of Applied SciencesBreda University of Applied SciencesOAI-PMH URL: https://pure.buas.nl/ws/oai
Breda University of Applied Sciences (BUas) wants to create close links between education, research and industry. To support this policy, knowledge and knowledge products are made as widely available as possible to business and government, BUas employees, and other interested parties. BUas uses Pure, a research information and registration system. An up-to-date overview of all knowledge output of BUas employees in this system can be found in this portal.
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:Bioinformatics Group, Wageningen University, Wageningen, the Netherlands Metagenomics, Omics, GenomicsBioinformatics Group, Wageningen University, Wageningen, the Netherlands
Paired Omics Data Platform (PoDP) was created to streamline access to paired omics data so humans and computers can access and read paired datasets as well as record and exploit validated links between BGCs and metabolites. The aim of the PoDP is to connect public metabolomics datasets to their genomic origins. The PoDP does not store any metabolomics or genomics datasets, but captures metadata defining pairs of omics datasets in existing public databases and platforms already validated and utilized by the genomics and metabolomics communities.
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re3data: r3d100010402
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:Naturalis Biodiversity Center Phylogenomics, Phylogenetics, Taxonomic classificationNaturalis Biodiversity Center
re3data: r3d100010170
TreeBASE is a repository of phylogenetic information, specifically user-submitted phylogenetic trees and the data used to generate them. TreeBASE accepts all types of phylogenetic data (e.g., trees of species, trees of populations, trees of genes) representing all biotic taxa. TreeBASE is temporarily offline except to provide access to editors/curators, as security updates are required before re-publishing the site.
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- Data Repository Singapore Compatibility:Not yet registeredPartners:BII Life Science, signaling, proteinBII
The AlloMAPS database provides data on the energetics of communication in proteins with well-documented allosteric regulation, allosteric signalling in PDBselect chains, and allosteric effects of mutations. In addition to energetics of allosteric signaling between known functional and regulatory sites, allosteric modulation caused by the binding to these sites, by SNPs, and by mutations designated by the user can be explored. Allosteric Signaling Maps (ASMs), which are produced via the exhaustive computational scanning for stabilizing and destabilizing mutations and for the modulation range caused by the sequence position are available for each protein/protein chain in the database.
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:Erfgoed centrum Zutphen Humanities and Social Sciences, History, HumanitiesErfgoed centrum Zutphen
re3data: r3d100013336
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:OpenAIRE CRIS v1.1Partners:Breda University of Applied SciencesBreda University of Applied SciencesOAI-PMH URL: https://pure.buas.nl/ws/oai
Breda University of Applied Sciences (BUas) wants to create close links between education, research and industry. To support this policy, knowledge and knowledge products are made as widely available as possible to business and government, BUas employees, and other interested parties. BUas uses Pure, a research information and registration system. An up-to-date overview of all knowledge output of BUas employees in this system can be found in this portal.
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:Bioinformatics Group, Wageningen University, Wageningen, the Netherlands Metagenomics, Omics, GenomicsBioinformatics Group, Wageningen University, Wageningen, the Netherlands
Paired Omics Data Platform (PoDP) was created to streamline access to paired omics data so humans and computers can access and read paired datasets as well as record and exploit validated links between BGCs and metabolites. The aim of the PoDP is to connect public metabolomics datasets to their genomic origins. The PoDP does not store any metabolomics or genomics datasets, but captures metadata defining pairs of omics datasets in existing public databases and platforms already validated and utilized by the genomics and metabolomics communities.
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re3data: r3d100010170
TreeBASE is a repository of phylogenetic information, specifically user-submitted phylogenetic trees and the data used to generate them. TreeBASE accepts all types of phylogenetic data (e.g., trees of species, trees of populations, trees of genes) representing all biotic taxa. TreeBASE is temporarily offline except to provide access to editors/curators, as security updates are required before re-publishing the site.
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