1,620 Data sources
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- Data Repository Netherlands Compatibility:Not yet registeredPartners:Ministry of Health Welfare and Sports, Directorate of Long-Term Care, NWO, VUMC, LASA Humanities and Social Sciences, Social Sciences, Social and Behavioural SciencesMinistry of Health Welfare and Sports, Directorate of Long-Term Care,NWO,VUMC, LASA
re3data: r3d100010149
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This database is compiled from the human genome nucleotide sequences obtained mostly in the Human Genome Projects. The database makes it possible to continuously improve classification and characterization of retroviral families. The HERV database now contains retroviruses from more than 90 % of the human genome.
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Open repository of the Mendel University in Brno for Open Access publications.
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Dolbico, the Database Of Local Biomolecular Conformers, stores DNA structural data including the information about DNA local spatial arrangement. The main aim of Dolbico is the exploration of DNA structure at a local level. The analysis of local DNA structure is based on a classification system that uses 9 torsional angles (7 backbone angles and two glycosidic torsions) to categorize dinucleotides into several distinct conformational families. The implemented classification workflow is able not only to classify dinucleotides into already existing classes, but is also able to discover new classes in new solved DNA structures.
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TeloBase is a curated database containing computationally predicted and experimentally confirmed telomere sequences of species across the whole tree of life. It contains information from the literature (1978 – September 2022) and predicted telomere motifs from publicly available NGS data stored in the SRA database (NCBI) and user submitted data. TeloBase is supplemented by internal taxonomy utilizing popular on-line taxonomic resources that enables in-house data filtration and graphical visualisation of telomere DNA evolutionary dynamics in the form of heat tree plots. Its manual and other relevant data (raw results from NGS data analysis and Atlas of telomere sequences) can be accessed on https://www.ceitec.eu/chromatin-molecular-complexes/rg51/tab?tabId=125#TeloBase.
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1,620 Data sources
- Data Repository Netherlands Compatibility:Not yet registeredPartners:Ministry of Health Welfare and Sports, Directorate of Long-Term Care, NWO, VUMC, LASA Humanities and Social Sciences, Social Sciences, Social and Behavioural SciencesMinistry of Health Welfare and Sports, Directorate of Long-Term Care,NWO,VUMC, LASA
re3data: r3d100010149
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This database is compiled from the human genome nucleotide sequences obtained mostly in the Human Genome Projects. The database makes it possible to continuously improve classification and characterization of retroviral families. The HERV database now contains retroviruses from more than 90 % of the human genome.
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Open repository of the Mendel University in Brno for Open Access publications.
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Dolbico, the Database Of Local Biomolecular Conformers, stores DNA structural data including the information about DNA local spatial arrangement. The main aim of Dolbico is the exploration of DNA structure at a local level. The analysis of local DNA structure is based on a classification system that uses 9 torsional angles (7 backbone angles and two glycosidic torsions) to categorize dinucleotides into several distinct conformational families. The implemented classification workflow is able not only to classify dinucleotides into already existing classes, but is also able to discover new classes in new solved DNA structures.
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TeloBase is a curated database containing computationally predicted and experimentally confirmed telomere sequences of species across the whole tree of life. It contains information from the literature (1978 – September 2022) and predicted telomere motifs from publicly available NGS data stored in the SRA database (NCBI) and user submitted data. TeloBase is supplemented by internal taxonomy utilizing popular on-line taxonomic resources that enables in-house data filtration and graphical visualisation of telomere DNA evolutionary dynamics in the form of heat tree plots. Its manual and other relevant data (raw results from NGS data analysis and Atlas of telomere sequences) can be accessed on https://www.ceitec.eu/chromatin-molecular-complexes/rg51/tab?tabId=125#TeloBase.
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