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- Institutional Repository Indonesia Compatibility:Not yet registeredPartners:ITBITBAll Research products
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUCKOO Life Science, Biomedical Science, Expression dataCUCKOO
The database of human DNA Methylation and Cancer (MethyCancer) is developed to study interplay of DNA methylation, gene expression and cancer. It hosts both highly integrated data of DNA methylation, cancer-related gene, mutation and cancer information from public resources, and the CpG Island (CGI) clones derived from our large-scale sequencing.
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This site provides access to the research output of the institution. Some content is only available to registered users. The interface is available in English.
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Circular RNAs (circRNAs) represent recently discovered novel regulatory non-coding RNAs. While they are present in many eukaryotes, there has been limited research on plant circRNAs. We developed PlantCircRNA (https://plant.deepbiology.cn/PlantCircRNA/) to fill this gap. The two most important features of PlantCircRNA are (1) it incorporates circRNAs from 94 plant species based on 39,245 RNA-sequencing samples, and (2) it imports the original AtCircDB and CropCircDB databases. We manually curated all circRNAs from published articles, and imported them into the database. Furthermore, we added detailed information of tissue as well as abiotic stresses to the database. To help users understand these circRNAs, the database includes a detection score to measure their consistency and a naming system following the guidelines recently proposed for eukaryotes. Finally, we developed a comprehensive platform for users to visualize, analyze, and download data regarding specific circRNAs. This resource will serve as a home for plant circRNAs and provide the community with unprecedented insights into these mysterious molecule.
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re3data: r3d100011553
The European Variation Archive is an open-access archive that accepts submission of, and provides access to, all types of genetic variation data from all species. All users are able to download any dataset, or query our study catalogue via our variation table. Access to EVA data is also provided by RESTful web services for a variety of applications, such as annotation pipelines.
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This site hosts the research output of the institution. The interface is available in English.
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EndoQuad enables users to easily access, download, and repurpose endogenous G4s (eG4s) data for their own research, and contains experimentally validated DNA eG4s.
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- Institutional Repository Indonesia Compatibility:Not yet registeredPartners:ITBITBAll Research products
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUCKOO Life Science, Biomedical Science, Expression dataCUCKOO
The database of human DNA Methylation and Cancer (MethyCancer) is developed to study interplay of DNA methylation, gene expression and cancer. It hosts both highly integrated data of DNA methylation, cancer-related gene, mutation and cancer information from public resources, and the CpG Island (CGI) clones derived from our large-scale sequencing.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Indonesia Compatibility:Not yet registeredPartners:Universitas Negeri Medan, State University of Medan MultidisciplinaryUniversitas Negeri Medan, State University of Medan
This site provides access to the research output of the institution. Some content is only available to registered users. The interface is available in English.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:SDAU Plant Ecology, Botany, geneSDAU
Circular RNAs (circRNAs) represent recently discovered novel regulatory non-coding RNAs. While they are present in many eukaryotes, there has been limited research on plant circRNAs. We developed PlantCircRNA (https://plant.deepbiology.cn/PlantCircRNA/) to fill this gap. The two most important features of PlantCircRNA are (1) it incorporates circRNAs from 94 plant species based on 39,245 RNA-sequencing samples, and (2) it imports the original AtCircDB and CropCircDB databases. We manually curated all circRNAs from published articles, and imported them into the database. Furthermore, we added detailed information of tissue as well as abiotic stresses to the database. To help users understand these circRNAs, the database includes a detection score to measure their consistency and a naming system following the guidelines recently proposed for eukaryotes. Finally, we developed a comprehensive platform for users to visualize, analyze, and download data regarding specific circRNAs. This resource will serve as a home for plant circRNAs and provide the community with unprecedented insights into these mysterious molecule.
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re3data: r3d100011553
The European Variation Archive is an open-access archive that accepts submission of, and provides access to, all types of genetic variation data from all species. All users are able to download any dataset, or query our study catalogue via our variation table. Access to EVA data is also provided by RESTful web services for a variety of applications, such as annotation pipelines.
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This site hosts the research output of the institution. The interface is available in English.
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EndoQuad enables users to easily access, download, and repurpose endogenous G4s (eG4s) data for their own research, and contains experimentally validated DNA eG4s.
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