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- Data Repository United Kingdom Compatibility:Not yet registeredPartners:EBI Translational Medicine, Personalized Medicine, Preclinical StudiesEBI
re3data: r3d100012961
CancerModels.Org is a cancer research platform that aggregates clinical, genomic and functional data from various types of patient-derived cancer models (PDCMs)- xenografts, organoids and cell lines. Currently, the portal has over 7000 PDCMs across multiple cancer types, including rare paediatric models and models from minority ethnic backgrounds. The CancerModels.Org standardises, harmonises and integrates clinical metadata, molecular and treatment-based data from academic and commercial providers worldwide. It is the largest open access and free to consumer resource of this kind.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom, France, European Union Compatibility:Not yet registeredPartners:ELIXIR-Hub, UK, URGI INRAE, transPLANT Life Science, Genetic map, Genome mapELIXIR-Hub, UK,URGI INRAE,transPLANT
re3data: r3d100012647
GnpIS is a multispecies integrative information system dedicated to plant and fungi pests. It bridges genetic and genomic data, allowing researchers access to both genetic information (e.g. genetic maps, quantitative trait loci, association genetics, markers, polymorphisms, germplasms, phenotypes and genotypes) and genomic data (e.g. genomic sequences, physical maps, genome annotation and expression data) for species of agronomical interest. GnpIS is used by both large international projects and plant science departments at the French National Institute for Agricultural Research. It is regularly improved and released several times per year. GnpIS is accessible through a web portal and allows to browse different types of data either independently through dedicated interfaces or simultaneously using a quick search ('google like search') or advanced search (Biomart, Galaxy, Intermine) tools.
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For further information contact us at helpdesk@openaire.eu - Data Repository Sweden, Netherlands Compatibility:Not yet registeredPartners:University of Gothenburg, Faculty of Arts, Department of Swedish, CLARIN, University of Gothenburg, Department of Swedish, Multilinguaism, Language Technology, Swedish National Data Service, SWE-CLARIN Humanities and Social Sciences, Linguistics, HumanitiesUniversity of Gothenburg, Faculty of Arts, Department of Swedish,CLARIN,University of Gothenburg, Department of Swedish, Multilinguaism, Language Technology,Swedish National Data Service,SWE-CLARIN
re3data: r3d100011013
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A managed open access data repository and visualization platform for collaborative sharing of anonymised, individual-level pharmacokinetic data.
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The PIR SuperFamily concept is being used as a guiding principle to provide comprehensive and non-overlapping clustering of UniProtKB sequences into a hierarchical order to reflect their evolutionary relationships.
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For further information contact us at helpdesk@openaire.eu - Data Repository Belgium, Switzerland, Spain, Luxembourg Compatibility:Not yet registeredPartners:DG SANTE, IOM, CIDOB, EC, MPG MIGRATION POLICY GROUP +1 partners Humanities and Social Sciences, Education Sciences, Research on Socialization and Educational Institutions and ProfessionsDG SANTE,IOM,CIDOB,EC,MPG MIGRATION POLICY GROUP,CHAFEA
re3data: r3d100013248
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:CEFAS Life Sciences, Basic Biological and Medical Research, BiochemistryCEFAS
re3data: r3d100013673
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EBI Bioinformatics, Structural Biology, Protein structureEBI
PDBe-KB (Protein Data Bank in Europe - Knowledge Base) is a community-driven resource managed by the PDBe team, collating functional annotations and predictions for structure data in the PDB archive. PDBe-KB is a collaborative effort between PDBe and a diverse group of bioinformatics resources and research teams. The goal of PDBe-KB is two-fold: (i) to increase the visibility and reduce the fragmentation of annotations contributed by specialist data resources, and to make these data more findable, accessible, interoperable and reusable (FAIR) and (ii) to place macromolecular structure data in their biological context, thus facilitating their use by the broader scientific community in fundamental and applied research.
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re3data: r3d100010859
The aim of a World Register of Marine Species (WoRMS) is to provide an authoritative and comprehensive list of names of marine organisms, including information on synonymy. While highest priority goes to valid names, other names in use are included so that this register can serve as a guide to interpret taxonomic literature.
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- Data Repository United Kingdom Compatibility:Not yet registeredPartners:EBI Translational Medicine, Personalized Medicine, Preclinical StudiesEBI
re3data: r3d100012961
CancerModels.Org is a cancer research platform that aggregates clinical, genomic and functional data from various types of patient-derived cancer models (PDCMs)- xenografts, organoids and cell lines. Currently, the portal has over 7000 PDCMs across multiple cancer types, including rare paediatric models and models from minority ethnic backgrounds. The CancerModels.Org standardises, harmonises and integrates clinical metadata, molecular and treatment-based data from academic and commercial providers worldwide. It is the largest open access and free to consumer resource of this kind.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom, France, European Union Compatibility:Not yet registeredPartners:ELIXIR-Hub, UK, URGI INRAE, transPLANT Life Science, Genetic map, Genome mapELIXIR-Hub, UK,URGI INRAE,transPLANT
re3data: r3d100012647
GnpIS is a multispecies integrative information system dedicated to plant and fungi pests. It bridges genetic and genomic data, allowing researchers access to both genetic information (e.g. genetic maps, quantitative trait loci, association genetics, markers, polymorphisms, germplasms, phenotypes and genotypes) and genomic data (e.g. genomic sequences, physical maps, genome annotation and expression data) for species of agronomical interest. GnpIS is used by both large international projects and plant science departments at the French National Institute for Agricultural Research. It is regularly improved and released several times per year. GnpIS is accessible through a web portal and allows to browse different types of data either independently through dedicated interfaces or simultaneously using a quick search ('google like search') or advanced search (Biomart, Galaxy, Intermine) tools.
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For further information contact us at helpdesk@openaire.eu - Data Repository Sweden, Netherlands Compatibility:Not yet registeredPartners:University of Gothenburg, Faculty of Arts, Department of Swedish, CLARIN, University of Gothenburg, Department of Swedish, Multilinguaism, Language Technology, Swedish National Data Service, SWE-CLARIN Humanities and Social Sciences, Linguistics, HumanitiesUniversity of Gothenburg, Faculty of Arts, Department of Swedish,CLARIN,University of Gothenburg, Department of Swedish, Multilinguaism, Language Technology,Swedish National Data Service,SWE-CLARIN
re3data: r3d100011013
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A managed open access data repository and visualization platform for collaborative sharing of anonymised, individual-level pharmacokinetic data.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, United Kingdom Compatibility:Not yet registeredPartners:UWMC , EBI, UD Life Science, Proteomics, Sequence clusterUWMC ,EBI,UD
The PIR SuperFamily concept is being used as a guiding principle to provide comprehensive and non-overlapping clustering of UniProtKB sequences into a hierarchical order to reflect their evolutionary relationships.
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For further information contact us at helpdesk@openaire.eu - Data Repository Belgium, Switzerland, Spain, Luxembourg Compatibility:Not yet registeredPartners:DG SANTE, IOM, CIDOB, EC, MPG MIGRATION POLICY GROUP +1 partners Humanities and Social Sciences, Education Sciences, Research on Socialization and Educational Institutions and ProfessionsDG SANTE,IOM,CIDOB,EC,MPG MIGRATION POLICY GROUP,CHAFEA
re3data: r3d100013248
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For further information contact us at helpdesk@openaire.eu - Thematic Repository United Kingdom Compatibility:OpenAIRE Basic (DRIVER OA)Partners:Nature Publishing Group Biology and Biochemistry, Chemistry and Chemical Technology, Earth and Planetary SciencesNature Publishing GroupOAI-PMH URL: http://precedings.nature.com/oai2
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PDBe-KB (Protein Data Bank in Europe - Knowledge Base) is a community-driven resource managed by the PDBe team, collating functional annotations and predictions for structure data in the PDB archive. PDBe-KB is a collaborative effort between PDBe and a diverse group of bioinformatics resources and research teams. The goal of PDBe-KB is two-fold: (i) to increase the visibility and reduce the fragmentation of annotations contributed by specialist data resources, and to make these data more findable, accessible, interoperable and reusable (FAIR) and (ii) to place macromolecular structure data in their biological context, thus facilitating their use by the broader scientific community in fundamental and applied research.
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re3data: r3d100010859
The aim of a World Register of Marine Species (WoRMS) is to provide an authoritative and comprehensive list of names of marine organisms, including information on synonymy. While highest priority goes to valid names, other names in use are included so that this register can serve as a guide to interpret taxonomic literature.
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