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- Data Repository United Kingdom Compatibility:Not yet registeredPartners:Cambridge Systems Biology Centre, University of Cambridge, Cambridge, UK Knowledge and Information Systems, Data Management, Database ManagementCambridge Systems Biology Centre, University of Cambridge, Cambridge, UK
InterMine was formed in 2002 at the University of Cambridge, originally as a Drosophila-dedicated resource, before expanding to become organism-agnostic, enabling a large range of organisations around the world to create their own InterMines. There are many instances of InterMine installations, relating to particular model organisms. These can be searched individually or via a cross-Mine search function.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of), United States, United Kingdom Compatibility:Not yet registeredPartners:National Center for Protein Sciences, Beijing, China, ISB, WSU, UCSD, EBI Life Science, Proteomics, Mass spectrumNational Center for Protein Sciences, Beijing, China,ISB,WSU,UCSD,EBI
re3data: r3d100010692
The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository United Kingdom Compatibility:collected from a compatible aggregatorPartners:MBA Biology and Biochemistry, Chemistry and Chemical Technology, Earth and Planetary SciencesMBA
This site provides access to research output from the following three organisations based in Plymouth: The Marine Biological Association (MBA), Plymouth Marine Laboratory (PML) and the Sir Alister Hardy Foundation for Ocean Science (SAHFOS). The interface is available in English.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Netherlands Compatibility:OpenAIRE Data (funded, referenced datasets)Partners:HN, CNRS, Laboratoire Ligérien de Linguistique, CLARIN, Laboratoire de Langues & Civilisations à Tradition Orale +2 partners Linguistics, Humanities, Humanities and Social SciencesHN,CNRS,Laboratoire Ligérien de Linguistique,CLARIN,Laboratoire de Langues & Civilisations à Tradition Orale,CCIN2P3/CNRS,CINESOAI-PMH URL: https://cocoon.huma-num.fr/crdo_servlet/oai-pmh
Collections de corpus oraux numériques
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EBI Translational Medicine, Personalized Medicine, Preclinical StudiesEBI
re3data: r3d100012961
CancerModels.Org is a cancer research platform that aggregates clinical, genomic and functional data from various types of patient-derived cancer models (PDCMs)- xenografts, organoids and cell lines. Currently, the portal has over 7000 PDCMs across multiple cancer types, including rare paediatric models and models from minority ethnic backgrounds. The CancerModels.Org standardises, harmonises and integrates clinical metadata, molecular and treatment-based data from academic and commercial providers worldwide. It is the largest open access and free to consumer resource of this kind.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom, France, European Union Compatibility:Not yet registeredPartners:ELIXIR-Hub, UK, URGI INRAE, transPLANT Life Science, Genetic map, Genome mapELIXIR-Hub, UK,URGI INRAE,transPLANT
re3data: r3d100012647
GnpIS is a multispecies integrative information system dedicated to plant and fungi pests. It bridges genetic and genomic data, allowing researchers access to both genetic information (e.g. genetic maps, quantitative trait loci, association genetics, markers, polymorphisms, germplasms, phenotypes and genotypes) and genomic data (e.g. genomic sequences, physical maps, genome annotation and expression data) for species of agronomical interest. GnpIS is used by both large international projects and plant science departments at the French National Institute for Agricultural Research. It is regularly improved and released several times per year. GnpIS is accessible through a web portal and allows to browse different types of data either independently through dedicated interfaces or simultaneously using a quick search ('google like search') or advanced search (Biomart, Galaxy, Intermine) tools.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:IOC/UNESCO Environmental Science, Biodiversity, Marine BiologyIOC/UNESCO
re3data: r3d100010088
The Ocean Biodiversity (formerly Biogeographic) information System (OBIS) seeks to absorb, integrate, and assess isolated datasets into a larger, more comprehensive pictures of life in our oceans. The system hopes to stimulate research about our oceans to generate new hypotheses concerning evolutionary processes, species distributions, and roles of organisms in marine systems on a global scale. The abstract maps that OBIS generates are maps that contribute to the ‘big picture’ of our oceans: a comprehensive, collaborative, world-wide view of our oceans. OBIS provides a portal or gateway to many datasets containing information on where and when marine species have been recorded. The datasets are integrated so you can search them all seamlessly by species name, higher taxonomic level, geographic area, depth, and time; and then map and find environmental data related to the locations.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:IRD, CNES, Ifremer, Sismer, Météo-France, CNRS +2 partners Natural Sciences, Atmospheric Science and Oceanography, OceanographyIRD,CNES,Ifremer, Sismer,Météo-France,CNRS,IPEV,SHOM
re3data: r3d100011710
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re3data: r3d100010156
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- Data Repository United Kingdom Compatibility:Not yet registeredPartners:Cambridge Systems Biology Centre, University of Cambridge, Cambridge, UK Knowledge and Information Systems, Data Management, Database ManagementCambridge Systems Biology Centre, University of Cambridge, Cambridge, UK
InterMine was formed in 2002 at the University of Cambridge, originally as a Drosophila-dedicated resource, before expanding to become organism-agnostic, enabling a large range of organisations around the world to create their own InterMines. There are many instances of InterMine installations, relating to particular model organisms. These can be searched individually or via a cross-Mine search function.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of), United States, United Kingdom Compatibility:Not yet registeredPartners:National Center for Protein Sciences, Beijing, China, ISB, WSU, UCSD, EBI Life Science, Proteomics, Mass spectrumNational Center for Protein Sciences, Beijing, China,ISB,WSU,UCSD,EBI
re3data: r3d100010692
The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository United Kingdom Compatibility:collected from a compatible aggregatorPartners:MBA Biology and Biochemistry, Chemistry and Chemical Technology, Earth and Planetary SciencesMBA
This site provides access to research output from the following three organisations based in Plymouth: The Marine Biological Association (MBA), Plymouth Marine Laboratory (PML) and the Sir Alister Hardy Foundation for Ocean Science (SAHFOS). The interface is available in English.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Netherlands Compatibility:OpenAIRE Data (funded, referenced datasets)Partners:HN, CNRS, Laboratoire Ligérien de Linguistique, CLARIN, Laboratoire de Langues & Civilisations à Tradition Orale +2 partners Linguistics, Humanities, Humanities and Social SciencesHN,CNRS,Laboratoire Ligérien de Linguistique,CLARIN,Laboratoire de Langues & Civilisations à Tradition Orale,CCIN2P3/CNRS,CINESOAI-PMH URL: https://cocoon.huma-num.fr/crdo_servlet/oai-pmh
Collections de corpus oraux numériques
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EBI Translational Medicine, Personalized Medicine, Preclinical StudiesEBI
re3data: r3d100012961
CancerModels.Org is a cancer research platform that aggregates clinical, genomic and functional data from various types of patient-derived cancer models (PDCMs)- xenografts, organoids and cell lines. Currently, the portal has over 7000 PDCMs across multiple cancer types, including rare paediatric models and models from minority ethnic backgrounds. The CancerModels.Org standardises, harmonises and integrates clinical metadata, molecular and treatment-based data from academic and commercial providers worldwide. It is the largest open access and free to consumer resource of this kind.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom, France, European Union Compatibility:Not yet registeredPartners:ELIXIR-Hub, UK, URGI INRAE, transPLANT Life Science, Genetic map, Genome mapELIXIR-Hub, UK,URGI INRAE,transPLANT
re3data: r3d100012647
GnpIS is a multispecies integrative information system dedicated to plant and fungi pests. It bridges genetic and genomic data, allowing researchers access to both genetic information (e.g. genetic maps, quantitative trait loci, association genetics, markers, polymorphisms, germplasms, phenotypes and genotypes) and genomic data (e.g. genomic sequences, physical maps, genome annotation and expression data) for species of agronomical interest. GnpIS is used by both large international projects and plant science departments at the French National Institute for Agricultural Research. It is regularly improved and released several times per year. GnpIS is accessible through a web portal and allows to browse different types of data either independently through dedicated interfaces or simultaneously using a quick search ('google like search') or advanced search (Biomart, Galaxy, Intermine) tools.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:IOC/UNESCO Environmental Science, Biodiversity, Marine BiologyIOC/UNESCO
re3data: r3d100010088
The Ocean Biodiversity (formerly Biogeographic) information System (OBIS) seeks to absorb, integrate, and assess isolated datasets into a larger, more comprehensive pictures of life in our oceans. The system hopes to stimulate research about our oceans to generate new hypotheses concerning evolutionary processes, species distributions, and roles of organisms in marine systems on a global scale. The abstract maps that OBIS generates are maps that contribute to the ‘big picture’ of our oceans: a comprehensive, collaborative, world-wide view of our oceans. OBIS provides a portal or gateway to many datasets containing information on where and when marine species have been recorded. The datasets are integrated so you can search them all seamlessly by species name, higher taxonomic level, geographic area, depth, and time; and then map and find environmental data related to the locations.
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re3data: r3d100011710
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re3data: r3d100010156
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