- GB
- FR
- CA
- Thematic: No
- GB
- FR
- CA
- Thematic: No
- Data Repository France Compatibility:Not yet registeredPartners:LPL Phylogeny, Metagenomics, GenomicsLPL
Ocean Gene Atlas(OGA) is a webservice to explore the biogeography of marine genes based on sequence similarity with environmental genomics datasets. OGA is currently implemented with the Tara Ocean Microbiome-Reference Gene Catalog database and the Marine Atlas of Tara Ocean Unigenes. Gene abundance estimates are computed for DNA metagenomes from the smallest Tara Oceans size fractions (from 0 to 3 µm, OM-RGC), and for RNA metatranscriptomes from Tara Oceans larger size fractions (0.8 to 2000µm, MATOU). OGA also includes curated Tara Oceans Eukaryotic Metagenome and Single-Cell Assembled Genomes (MAGs and SAGs), metagenomics-based transcriptomes (MGTs) and metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean (Arctic MAG+G).
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:CCSD, Canadian Community Economic Development Network Humanities and Social Sciences, Economics, Statistics and EconometricsCCSD,Canadian Community Economic Development Network
re3data: r3d100013935
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Princess Margaret Cancer Centre Epigenomics, Bioinformatics, nucleotidePrincess Margaret Cancer Centre
re3data: r3d100013918
DNAmod is an open-source database (https://dnamod.hoffmanlab.org) that catalogues DNA modifications and provides a single source to learn about their properties. The database annotates the chemical properties and structures of all curated modified DNA bases, and a much larger list of candidate chemical entities. DNAmod includes manual annotations of available sequencing methods, descriptions of their occurrence in nature, and provides existing and suggested nomenclature. DNAmod enables researchers to rapidly review previous work, select mapping techniques, and track recent developments concerning modified bases of interest.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EMBL-EBI Genomics, Genetic Polymorphism, curated informationEMBL-EBI
re3data: r3d100010814
The Database of Genomic Variants archive (DGVa) is a repository that provides archiving, accessioning and distribution of publicly available genomic structural variants, in all species.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository United Kingdom Compatibility:OpenAIRE PubRepos v4.0Partners:University of Warwick MultidisciplinaryUniversity of Warwick
re3data: r3d100012415
OAI-PMH URL: http://wrap.warwick.ac.uk/cgi/oai2This site provides access to the research output of the institution. Users may set up Atom or RSS feeds to be alerted to new content. The interface is available in English.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Canada Compatibility:Not yet registeredPartners:University of MontrealUniversity of Montreal
This site allows access to the digital collection of the University of Montreal. The interface is available in English or French, content is a mixture of the two.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Fredericton Humanities and Social Sciences, Life Sciences, Natural SciencesFredericton
re3data: r3d100014027
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:NERC, BAS Environmental Science, Earth Science, centrally registered identifierNERC,BAS
re3data: r3d100010120
The UK Polar Data Centre (UK PDC) is the Natural Environment Research Council's (NERC) Designated Data Centre for polar science. It is the focal point for Arctic and Antarctic environmental data management in the UK.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, France, Colombia Compatibility:Not yet registeredPartners:Harvard Dataverse, CGIAR, CIAT , Alliance of Bioversity and CIAT Life Sciences, Plant Sciences, Agriculture, Forestry, Horticulture and Veterinary MedicineHarvard Dataverse,CGIAR,CIAT ,Alliance of Bioversity and CIAT
re3data: r3d100011880
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- Data Repository France Compatibility:Not yet registeredPartners:LPL Phylogeny, Metagenomics, GenomicsLPL
Ocean Gene Atlas(OGA) is a webservice to explore the biogeography of marine genes based on sequence similarity with environmental genomics datasets. OGA is currently implemented with the Tara Ocean Microbiome-Reference Gene Catalog database and the Marine Atlas of Tara Ocean Unigenes. Gene abundance estimates are computed for DNA metagenomes from the smallest Tara Oceans size fractions (from 0 to 3 µm, OM-RGC), and for RNA metatranscriptomes from Tara Oceans larger size fractions (0.8 to 2000µm, MATOU). OGA also includes curated Tara Oceans Eukaryotic Metagenome and Single-Cell Assembled Genomes (MAGs and SAGs), metagenomics-based transcriptomes (MGTs) and metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean (Arctic MAG+G).
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:CCSD, Canadian Community Economic Development Network Humanities and Social Sciences, Economics, Statistics and EconometricsCCSD,Canadian Community Economic Development Network
re3data: r3d100013935
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Princess Margaret Cancer Centre Epigenomics, Bioinformatics, nucleotidePrincess Margaret Cancer Centre
re3data: r3d100013918
DNAmod is an open-source database (https://dnamod.hoffmanlab.org) that catalogues DNA modifications and provides a single source to learn about their properties. The database annotates the chemical properties and structures of all curated modified DNA bases, and a much larger list of candidate chemical entities. DNAmod includes manual annotations of available sequencing methods, descriptions of their occurrence in nature, and provides existing and suggested nomenclature. DNAmod enables researchers to rapidly review previous work, select mapping techniques, and track recent developments concerning modified bases of interest.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EMBL-EBI Genomics, Genetic Polymorphism, curated informationEMBL-EBI
re3data: r3d100010814
The Database of Genomic Variants archive (DGVa) is a repository that provides archiving, accessioning and distribution of publicly available genomic structural variants, in all species.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository United Kingdom Compatibility:OpenAIRE PubRepos v4.0Partners:University of Warwick MultidisciplinaryUniversity of Warwick
re3data: r3d100012415
OAI-PMH URL: http://wrap.warwick.ac.uk/cgi/oai2This site provides access to the research output of the institution. Users may set up Atom or RSS feeds to be alerted to new content. The interface is available in English.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Canada Compatibility:Not yet registeredPartners:University of MontrealUniversity of Montreal
This site allows access to the digital collection of the University of Montreal. The interface is available in English or French, content is a mixture of the two.
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re3data: r3d100014027
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:NERC, BAS Environmental Science, Earth Science, centrally registered identifierNERC,BAS
re3data: r3d100010120
The UK Polar Data Centre (UK PDC) is the Natural Environment Research Council's (NERC) Designated Data Centre for polar science. It is the focal point for Arctic and Antarctic environmental data management in the UK.
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re3data: r3d100011880
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