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- Data Repository France Compatibility:Not yet registeredPartners:MNHN Mineralogy, Biodiversity, BiologyMNHN
The National Inventory of Natural Heritage (INPN) is a repository for data needed for the development of conservation strategies and the dissemination of information as well as national and international reports relating to the French natural heritage (plant and animal species, natural habitats and geological heritage). It was created to provide a national reference bank for French biodiversity.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:Royal Botanic Gardens Life Science, deoxyribonucleic acid, genomeRoyal Botanic Gardens
A database containing genome size (C-value) data for all groups of land plants and red, green and brown algae.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Benin Compatibility:Not yet registeredPartners:CGIAR, Africa Rice Center Donors, RICE CRP, WARDA Life Sciences, Agriculture, Forestry, Horticulture and Veterinary MedicineCGIAR,Africa Rice Center Donors,RICE CRP,WARDA
re3data: r3d100011251
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For further information contact us at helpdesk@openaire.eu - Institutional Repository United Kingdom Compatibility:Not yet registeredPartners:LJMULJMUAll Research products
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom, United States Compatibility:Not yet registeredPartners:Babraham Institute, UC, Cardiff University Life Science, Systems Biology, MetabolomicsBabraham Institute,UC,Cardiff University
re3data: r3d100012315
LIPID Metabolites And Pathways Strategy (LIPID MAPS®) is a multi-institutional supported website and database that provides access to a large number of globally used lipidomics resources. LIPID MAPS® has internationally led the field of lipid curation, classification, and nomenclature since 2003. We strive to produce new open-access databases, informatics tools and lipidomics-focused training activities will be generated and made publicly available for researchers studying lipids in health and disease. LIPID MAPS® is currently funded by a multi-institutional grant from Wellcome, held jointly by Cardiff University, University of California San Diego, the Babraham Institute Cambridge, and Swansea University, as well as an Innovation Study funded by ELIXIR. This current phase will see that LIPID MAPS® is maintained and importantly, further developed in line with the global demand and development of lipidomics. LIPID MAPS® has an internationally recognized classification system and the largest curated lipid structure database in the world.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:NIBSC Life Science, Preclinical Studies, stem cellNIBSC
The UK Stem Cell Bank (UKSCB) facilitates the use and sharing of quality-controlled stem cell lines to support scientific research and clinical development of stem cell therapies. The work of the UK Stem Cell Bank covers three main areas: banking for all UK-derived human embryonic stem cell lines, research in the standardisation, quality and safety of human pluripotent stem cell (hPSC)-based products, and regulation regarding international best practice, policies and guidelines relating to stem cell use and regulation around the world.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:Bodleian Library, University of Oxford, Oxford, UK Digital Image Processing, Resource metadata, curated informationBodleian Library, University of Oxford, Oxford, UK
Through the generous support of The Polonsky Foundation, this project made 1.5 million digitized pages freely available. Portions of the Biblioteca Apostolica Vaticana (Vatican Library) and the Bodleian Libraries’ collections of Hebrew manuscripts, Greek manuscripts, and incunabula were selected for digitization by a team of scholars and curators from around the world. The selection process was informed by a balance of scholarly and practical concerns; conservation staff at the Bodleian and Vatican Libraries worked with curators to assess not only the significance of the content, but the physical condition of the items, prioritizing items that are robust enough to withstand being transported to the imaging studio and handled by the photographers. In order to preserve the integrity and completeness of the manuscript collections, the libraries also agreed to digitize whole collections where appropriate. While the Vatican and the Bodleian had been creating digital images from our collections for a number of years, this project provided an opportunity for both libraries to increase the scale of their digitization services. In both cases, this meant significant investments in the equipment, infrastructure and people that make digitization possible. Over the course of this project, both libraries also revealed information about their digitization techniques and methods.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Germany Compatibility:Not yet registeredPartners:FHWSFHWSAll Research products
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Spain Compatibility:Not yet registeredPartners:CNRS, IBE Taxonomy, Genetics, Taxonomic classificationCNRS,IBE
The PR2 reference sequence database began as part of the BioMarks project from previous work in the Plankton Group of the Station Biologique of Roscoff. It aims to provide a reference database of carefully annotated 18S rRNA sequences using nine unique taxonomic fields (from domain to species). At present, it contains over 240,000 sequences. Although it focuses on protists, it also contains sequences from metazoa, fungi and plants as well a limited set of 16S sequences from plastids and bacteria. Several metadata fields are available for many sequences, including geo-localisation, whether it originates from a culture or a natural sample, and host type. The annotation of PR2 is performed by experts in each of the taxonomic groups.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:Cambridge Systems Biology Centre, University of Cambridge, Cambridge, UK, Institute of Structural and Molecular Biology, University College London, London, UK Life Science, Protein domain, Gene nameCambridge Systems Biology Centre, University of Cambridge, Cambridge, UK,Institute of Structural and Molecular Biology, University College London, London, UK
re3data: r3d100011478
PomBase is a model organism database that provides organization of and access to scientific data for the fission yeast Schizosaccharomyces pombe. PomBase supports genomic sequence and features, genome-wide datasets and manual literature curation as well as providing structural and functional annotation and access to large-scale data sets.
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- Data Repository France Compatibility:Not yet registeredPartners:MNHN Mineralogy, Biodiversity, BiologyMNHN
The National Inventory of Natural Heritage (INPN) is a repository for data needed for the development of conservation strategies and the dissemination of information as well as national and international reports relating to the French natural heritage (plant and animal species, natural habitats and geological heritage). It was created to provide a national reference bank for French biodiversity.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:Royal Botanic Gardens Life Science, deoxyribonucleic acid, genomeRoyal Botanic Gardens
A database containing genome size (C-value) data for all groups of land plants and red, green and brown algae.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Benin Compatibility:Not yet registeredPartners:CGIAR, Africa Rice Center Donors, RICE CRP, WARDA Life Sciences, Agriculture, Forestry, Horticulture and Veterinary MedicineCGIAR,Africa Rice Center Donors,RICE CRP,WARDA
re3data: r3d100011251
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom, United States Compatibility:Not yet registeredPartners:Babraham Institute, UC, Cardiff University Life Science, Systems Biology, MetabolomicsBabraham Institute,UC,Cardiff University
re3data: r3d100012315
LIPID Metabolites And Pathways Strategy (LIPID MAPS®) is a multi-institutional supported website and database that provides access to a large number of globally used lipidomics resources. LIPID MAPS® has internationally led the field of lipid curation, classification, and nomenclature since 2003. We strive to produce new open-access databases, informatics tools and lipidomics-focused training activities will be generated and made publicly available for researchers studying lipids in health and disease. LIPID MAPS® is currently funded by a multi-institutional grant from Wellcome, held jointly by Cardiff University, University of California San Diego, the Babraham Institute Cambridge, and Swansea University, as well as an Innovation Study funded by ELIXIR. This current phase will see that LIPID MAPS® is maintained and importantly, further developed in line with the global demand and development of lipidomics. LIPID MAPS® has an internationally recognized classification system and the largest curated lipid structure database in the world.
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The UK Stem Cell Bank (UKSCB) facilitates the use and sharing of quality-controlled stem cell lines to support scientific research and clinical development of stem cell therapies. The work of the UK Stem Cell Bank covers three main areas: banking for all UK-derived human embryonic stem cell lines, research in the standardisation, quality and safety of human pluripotent stem cell (hPSC)-based products, and regulation regarding international best practice, policies and guidelines relating to stem cell use and regulation around the world.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:Bodleian Library, University of Oxford, Oxford, UK Digital Image Processing, Resource metadata, curated informationBodleian Library, University of Oxford, Oxford, UK
Through the generous support of The Polonsky Foundation, this project made 1.5 million digitized pages freely available. Portions of the Biblioteca Apostolica Vaticana (Vatican Library) and the Bodleian Libraries’ collections of Hebrew manuscripts, Greek manuscripts, and incunabula were selected for digitization by a team of scholars and curators from around the world. The selection process was informed by a balance of scholarly and practical concerns; conservation staff at the Bodleian and Vatican Libraries worked with curators to assess not only the significance of the content, but the physical condition of the items, prioritizing items that are robust enough to withstand being transported to the imaging studio and handled by the photographers. In order to preserve the integrity and completeness of the manuscript collections, the libraries also agreed to digitize whole collections where appropriate. While the Vatican and the Bodleian had been creating digital images from our collections for a number of years, this project provided an opportunity for both libraries to increase the scale of their digitization services. In both cases, this meant significant investments in the equipment, infrastructure and people that make digitization possible. Over the course of this project, both libraries also revealed information about their digitization techniques and methods.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Spain Compatibility:Not yet registeredPartners:CNRS, IBE Taxonomy, Genetics, Taxonomic classificationCNRS,IBE
The PR2 reference sequence database began as part of the BioMarks project from previous work in the Plankton Group of the Station Biologique of Roscoff. It aims to provide a reference database of carefully annotated 18S rRNA sequences using nine unique taxonomic fields (from domain to species). At present, it contains over 240,000 sequences. Although it focuses on protists, it also contains sequences from metazoa, fungi and plants as well a limited set of 16S sequences from plastids and bacteria. Several metadata fields are available for many sequences, including geo-localisation, whether it originates from a culture or a natural sample, and host type. The annotation of PR2 is performed by experts in each of the taxonomic groups.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:Cambridge Systems Biology Centre, University of Cambridge, Cambridge, UK, Institute of Structural and Molecular Biology, University College London, London, UK Life Science, Protein domain, Gene nameCambridge Systems Biology Centre, University of Cambridge, Cambridge, UK,Institute of Structural and Molecular Biology, University College London, London, UK
re3data: r3d100011478
PomBase is a model organism database that provides organization of and access to scientific data for the fission yeast Schizosaccharomyces pombe. PomBase supports genomic sequence and features, genome-wide datasets and manual literature curation as well as providing structural and functional annotation and access to large-scale data sets.
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