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  • The IPD-MHC Database provides a centralised repository for sequences of the Major Histocompatibility Complex (MHC) from a number of different species. Through a number of international collaborations IPD is able to provide the MHC sequences of different species. The sequences provided by each group are curated by experts in the field and then submitted to the central database.

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  • PsychArchives is a disciplinary repository for psychological science and neighboring disciplines. Accommodating 20 different digital research object (DRO) types, including articles, preprints, research data, code, supplements, preregistrations, tests and multimedia objects, PsychArchives provides a digital space that integrates all research-related content relevant to psychology. PsychArchives is committed to the FAIR principles, facilitating the findability, accessibility, interoperability and reusability of research and research data.

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  • This site provides access to research output in film and media studies. The interface is available in German.

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  • This site provides access to the student output of the institution. The interface is available in German and English.

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  • The BonaRes Repository stores soil and agricultural research data from research projects and long-term field experiments which contribute significantly to the analysis of changes of soil and soil functions over the long term. Research data are described by the metadata following the BonaRes Metadata Schema (DOI: 10.20387/bonares-5pgg-8yrp) which combines international recognized standards for the description of geospatial data and research data. Metadata includes AGROVOC keywords.

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  • NeuronDB provides a dynamically searchable database of three types of neuronal properties: voltage gated conductances, neurotransmitter receptors, and neurotransmitter substances. It contains tools that provide for integration of these properties in a given type of neuron and compartment, and for comparison of properties across different types of neurons and compartments.

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  • The Eukaryotic Promoter Database (EPD) provides accurate transcription start site (TSS) information for promoters of 15 model organisms, from human to yeast to the malaria parasite Plasmodium falciparum. While the original database was a manually curated database based on published experiments, new promoter collections are now produced entirely automatically (under the name “EPDnew”) based on high-throughput transcript mapping data and high-quality gene annotation resources. Corresponding functional genomics data can be viewed in a genome browser, queried or analyzed via web interfaces, or exported in standard formats like FASTA or BED for subsequent analysis with other tools; of note, EPD is tightly integrated with two tool suites developed by our group: ChIP-Seq and Signal Search Analysis, for analysis of chromatin context and sequence motif respectively. EPD provides promoter viewers, designed with the aim of integrating and displaying information from different sources about, for instance, histone marks, transcription factor-binding sites or SNPs with known phenotypes. These viewers rely upon the UCSC genome browser as a visualization platform, which enables users to view data tracks from EPD jointly with tracks from UCSC or public track hubs.

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6,107 Data sources
  • The IPD-MHC Database provides a centralised repository for sequences of the Major Histocompatibility Complex (MHC) from a number of different species. Through a number of international collaborations IPD is able to provide the MHC sequences of different species. The sequences provided by each group are curated by experts in the field and then submitted to the central database.

    more_vert
  • PsychArchives is a disciplinary repository for psychological science and neighboring disciplines. Accommodating 20 different digital research object (DRO) types, including articles, preprints, research data, code, supplements, preregistrations, tests and multimedia objects, PsychArchives provides a digital space that integrates all research-related content relevant to psychology. PsychArchives is committed to the FAIR principles, facilitating the findability, accessibility, interoperability and reusability of research and research data.

    more_vert
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  • This site provides access to research output in film and media studies. The interface is available in German.

    more_vert
  • This site provides access to the student output of the institution. The interface is available in German and English.

    more_vert
  • more_vert
  • more_vert
  • The BonaRes Repository stores soil and agricultural research data from research projects and long-term field experiments which contribute significantly to the analysis of changes of soil and soil functions over the long term. Research data are described by the metadata following the BonaRes Metadata Schema (DOI: 10.20387/bonares-5pgg-8yrp) which combines international recognized standards for the description of geospatial data and research data. Metadata includes AGROVOC keywords.

    more_vert
  • NeuronDB provides a dynamically searchable database of three types of neuronal properties: voltage gated conductances, neurotransmitter receptors, and neurotransmitter substances. It contains tools that provide for integration of these properties in a given type of neuron and compartment, and for comparison of properties across different types of neurons and compartments.

    more_vert
  • The Eukaryotic Promoter Database (EPD) provides accurate transcription start site (TSS) information for promoters of 15 model organisms, from human to yeast to the malaria parasite Plasmodium falciparum. While the original database was a manually curated database based on published experiments, new promoter collections are now produced entirely automatically (under the name “EPDnew”) based on high-throughput transcript mapping data and high-quality gene annotation resources. Corresponding functional genomics data can be viewed in a genome browser, queried or analyzed via web interfaces, or exported in standard formats like FASTA or BED for subsequent analysis with other tools; of note, EPD is tightly integrated with two tool suites developed by our group: ChIP-Seq and Signal Search Analysis, for analysis of chromatin context and sequence motif respectively. EPD provides promoter viewers, designed with the aim of integrating and displaying information from different sources about, for instance, histone marks, transcription factor-binding sites or SNPs with known phenotypes. These viewers rely upon the UCSC genome browser as a visualization platform, which enables users to view data tracks from EPD jointly with tracks from UCSC or public track hubs.

    more_vert
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