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- Data Repository United Kingdom Compatibility:Not yet registeredPartners:University of Edinburgh, Data Library, EDINA, Jisc, HEFCW Humanities and Social Sciences, Life Sciences, Natural SciencesUniversity of Edinburgh, Data Library,EDINA,Jisc,HEFCW
re3data: r3d100010450
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re3data: r3d100012064
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re3data: r3d100012495
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:WTSI Life Science, Protein domain, proteinWTSI
The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is stored.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:Manchester Center for Integrative Systems Biology, Manchester, UK Life Science, Systems Biology, MetabolomicsManchester Center for Integrative Systems Biology, Manchester, UK
This is a portal to the consensus yeast metabolic network as reconstructed from the genome sequence and literature. It is a highly annotated metabolic map of Saccharomyces cerevisiae S288c that is periodically updated by a team of collaborators from various research groups.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository United Kingdom Compatibility:OpenAIRE Basic (DRIVER OA)Partners:Royal Holloway University of London MultidisciplinaryRoyal Holloway University of LondonOAI-PMH URL: http://digirep.rhul.ac.uk/p/oai
University repository providing access to the publication output of the institution. The interface is in English. Users may set up an RSS feed to be alerted to new content.
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For further information contact us at helpdesk@openaire.eu - Data Repository Belgium Compatibility:Not yet registeredPartners:Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium, VIB-UGent Center for Plant Systems Biology, Ghent, Belgium Life Science, Genomics, Genome annotationDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium,VIB-UGent Center for Plant Systems Biology, Ghent, Belgium
The Online Resource for Community Annotation of Eukaryotes (ORCAE) is an online genome annotation resource offering users the necessary tools and information to validate and correct gene annotations. It is a gene-centric wiki-style annotation portal offering public access to a wide variety of plant, fungal and animal genomes. The basic setup of ORCAE is highly comparable to wiki systems such as MediaWiki, and the information page for each gene can be seen as a ‘topic’ page of a traditional text wiki.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EBI Comparative Genomics, Genomics, DNA sequenceEBI
re3data: r3d100011199
Ensembl Plants holds the genomes of plants of significant interest. These range from those of agricultural importance, those which support primary research and of environmental interest. Ensembl Plants datasets are constructed in a direct collaboration with the Gramene resource. The resource holds the genomes of wheat, rice, corn and mouse ear cress amongst others.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CNGB Life Science, Virology, PhylogeneticsCNGB
China National GeneBank DataBase (CNGBdb) is an official partner of the GISAID Initiative. It provides access to EpiCoV and features the most complete collection of hCoV-19 genome sequences along with related clinical and epidemiological data. With the data from this database scientific researchers can construct a virus phylogenetic tree to reveal the characteristics of the pathogen, and provide effective references for the study and analysis of the evolutionary source and pathological mechanism of the novel coronavirus.
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- Data Repository United Kingdom Compatibility:Not yet registeredPartners:University of Edinburgh, Data Library, EDINA, Jisc, HEFCW Humanities and Social Sciences, Life Sciences, Natural SciencesUniversity of Edinburgh, Data Library,EDINA,Jisc,HEFCW
re3data: r3d100010450
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:WTSI Life Science, Protein domain, proteinWTSI
The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is stored.
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This is a portal to the consensus yeast metabolic network as reconstructed from the genome sequence and literature. It is a highly annotated metabolic map of Saccharomyces cerevisiae S288c that is periodically updated by a team of collaborators from various research groups.
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University repository providing access to the publication output of the institution. The interface is in English. Users may set up an RSS feed to be alerted to new content.
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For further information contact us at helpdesk@openaire.eu - Data Repository Belgium Compatibility:Not yet registeredPartners:Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium, VIB-UGent Center for Plant Systems Biology, Ghent, Belgium Life Science, Genomics, Genome annotationDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium,VIB-UGent Center for Plant Systems Biology, Ghent, Belgium
The Online Resource for Community Annotation of Eukaryotes (ORCAE) is an online genome annotation resource offering users the necessary tools and information to validate and correct gene annotations. It is a gene-centric wiki-style annotation portal offering public access to a wide variety of plant, fungal and animal genomes. The basic setup of ORCAE is highly comparable to wiki systems such as MediaWiki, and the information page for each gene can be seen as a ‘topic’ page of a traditional text wiki.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EBI Comparative Genomics, Genomics, DNA sequenceEBI
re3data: r3d100011199
Ensembl Plants holds the genomes of plants of significant interest. These range from those of agricultural importance, those which support primary research and of environmental interest. Ensembl Plants datasets are constructed in a direct collaboration with the Gramene resource. The resource holds the genomes of wheat, rice, corn and mouse ear cress amongst others.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CNGB Life Science, Virology, PhylogeneticsCNGB
China National GeneBank DataBase (CNGBdb) is an official partner of the GISAID Initiative. It provides access to EpiCoV and features the most complete collection of hCoV-19 genome sequences along with related clinical and epidemiological data. With the data from this database scientific researchers can construct a virus phylogenetic tree to reveal the characteristics of the pathogen, and provide effective references for the study and analysis of the evolutionary source and pathological mechanism of the novel coronavirus.
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