- GB
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- Thematic: No
- Institutional Repository United Kingdom Compatibility:collected from a compatible aggregatorPartners:ARU MultidisciplinaryARU
This site provides access to the research output of the institution. Many items are not available as full-text. The interface is in English. Users may set up RSS feeds to be alerted to new content. Full guidance and help materials are provided on the site. This includes ‘ARRO: A Comprehensive Guide’, which gives details of the policies and processes that apply to ARRO.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:Institute of Structural and Molecular Biology, University College London, London, UK Evolutionary Biology, Biology, StructureInstitute of Structural and Molecular Biology, University College London, London, UK
re3data: r3d100012629
The CATH database is a free, publicly available online resource that provides information on the evolutionary relationships of protein domains. It provides a hierarchical domain classification of protein structures in the Protein Data Bank. Protein structures are classified using a combination of automated and manual procedures. There are four major levels in this hierarchy; Class (secondary structure classification, e.g. mostly alpha), Architecture (classification based on overall shape), Topology (fold family) and Homologous superfamily (protein domains which are thought to share a common ancestor).
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SNPeffect is a database for phenotyping human single nucleotide polymorphisms (SNPs). SNPeffect primarily focuses on the molecular characterization and annotation of disease and polymorphism variants in the human proteome. Further, SNPeffect holds per-variant annotations on functional sites, structural features and post-translational modification.
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Ensembl Plants holds the genomes of plants of significant interest. These range from those of agricultural importance, those which support primary research and of environmental interest. Ensembl Plants datasets are constructed in a direct collaboration with the Gramene resource. The resource holds the genomes of wheat, rice, corn and mouse ear cress amongst others.
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FlyMine is an integrated database of genomic, expression and protein data for Drosophila, Anopheles and C. elegans. Its main focus is genomic and proteomics data for Drosophila and other insects. It provides access to integrated data at a number of different levels, from browsing to construction of complex queries, which can be executed on either single items or lists.
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re3data: r3d100012629
The CATH database is a free, publicly available online resource that provides information on the evolutionary relationships of protein domains. It provides a hierarchical domain classification of protein structures in the Protein Data Bank. Protein structures are classified using a combination of automated and manual procedures. There are four major levels in this hierarchy; Class (secondary structure classification, e.g. mostly alpha), Architecture (classification based on overall shape), Topology (fold family) and Homologous superfamily (protein domains which are thought to share a common ancestor).
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SNPeffect is a database for phenotyping human single nucleotide polymorphisms (SNPs). SNPeffect primarily focuses on the molecular characterization and annotation of disease and polymorphism variants in the human proteome. Further, SNPeffect holds per-variant annotations on functional sites, structural features and post-translational modification.
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Ensembl Plants holds the genomes of plants of significant interest. These range from those of agricultural importance, those which support primary research and of environmental interest. Ensembl Plants datasets are constructed in a direct collaboration with the Gramene resource. The resource holds the genomes of wheat, rice, corn and mouse ear cress amongst others.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, China (People's Republic of), Switzerland, United States, Germany Compatibility:Not yet registeredPartners:IN2P3, IHEP, CERN, SLAC, IN2P3 +2 partners Natural Sciences, Particles, Nuclei and Fields, PhysicsIN2P3,IHEP,CERN,SLAC,IN2P3,Fermilab,Deutsches Elektronen-Synchrotron DESY
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For further information contact us at helpdesk@openaire.eu - Institutional Repository United Kingdom Compatibility:OpenAIRE Basic (DRIVER OA)Partners:University of St Andrews MultidisciplinaryUniversity of St Andrews
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FlyMine is an integrated database of genomic, expression and protein data for Drosophila, Anopheles and C. elegans. Its main focus is genomic and proteomics data for Drosophila and other insects. It provides access to integrated data at a number of different levels, from browsing to construction of complex queries, which can be executed on either single items or lists.
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