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- Data Repository Canada Compatibility:Not yet registeredPartners:Department of Plant Sciences, University of Saskatchewan, Canada Agriculture, Life Science, GeneticsDepartment of Plant Sciences, University of Saskatchewan, Canada
KnowPulse is a breeder-focused web portal that integrates genetics and genomics of pulse crops with model genomes.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS Comparative Genomics, Population Genetics, whole genome sequencing assayNGDC, CNCB / BIG, CAS
Virtual Chinese Genome Database (VCGDB) is a genome database of the Chinese population based on the whole genome sequencing data of 194 individuals. We are unsure when this database was last updated, and as such we have marked this record as Uncertain. Please contact us if you have any information on its current status.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Princess Margaret Cancer Centre Epigenomics, Bioinformatics, nucleotidePrincess Margaret Cancer Centre
re3data: r3d100013918
DNAmod is an open-source database (https://dnamod.hoffmanlab.org) that catalogues DNA modifications and provides a single source to learn about their properties. The database annotates the chemical properties and structures of all curated modified DNA bases, and a much larger list of candidate chemical entities. DNAmod includes manual annotations of available sequencing methods, descriptions of their occurrence in nature, and provides existing and suggested nomenclature. DNAmod enables researchers to rapidly review previous work, select mapping techniques, and track recent developments concerning modified bases of interest.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EMBL-EBI Genomics, Genetic Polymorphism, curated informationEMBL-EBI
re3data: r3d100010814
The Database of Genomic Variants archive (DGVa) is a repository that provides archiving, accessioning and distribution of publicly available genomic structural variants, in all species.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:NHLBI, Canada's Michael Smith Genome Sciences Centre, BC Cancer Foundation, Genome Canada, BCCA Life Sciences, Zoology, Animal Genetics, Cell and Developmental BiologyNHLBI,Canada's Michael Smith Genome Sciences Centre,BC Cancer Foundation,Genome Canada,BCCA
re3data: r3d100010645
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For further information contact us at helpdesk@openaire.eu - Data Repository Germany, Netherlands Compatibility:Not yet registeredPartners:CLARIN-D, University of Cologne, Data Center for the Humanities, CLARIN Humanities and Social Sciences, Linguistics, HumanitiesCLARIN-D,University of Cologne, Data Center for the Humanities,CLARIN
re3data: r3d100012786
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:CentERdata, DANS Humanities and Social Sciences, Social Sciences, Empirical Social ResearchCentERdata,DANS
re3data: r3d100011335
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:ECCC Natural Sciences, Atmospheric Science and Oceanography, Atmospheric ScienceECCC
re3data: r3d100012089
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:Tyler Technologies, Government of New Brunswick Humanities and Social Sciences, Life Sciences, Natural SciencesTyler Technologies,Government of New Brunswick
re3data: r3d100013946
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:University of Oxford Biotherapeutics, Structural Biology, immunoglobulin complex, circulatingUniversity of Oxford
The Therapeutic Structural Antibody Database tracks all antibody- and nanobody-related therapeutics recognized by the World Health Organisation (WHO), and identifies any corresponding structures in the Structural Antibody Database (SAbDab) with near-exact or exact variable domain sequence matches. Thera-SAbDab is synchronized with SAbDab to update weekly, reflecting new Protein Data Bank entries and the availability of new sequence data published by the WHO. Each therapeutic summary page lists structural coverage (with links to the appropriate SAbDab entries), alignments showing where any near-matches deviate in sequence, and accompanying metadata, such as intended target and investigated conditions. Thera-SAbDab can be queried by therapeutic name, by a combination of metadata, or by variable domain sequence - returning all therapeutics that are within a specified sequence identity over a specified region of the query. The sequences of all therapeutics listed in Thera-SAbDab are downloadable as a single file with accompanying metadata.
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- Data Repository Canada Compatibility:Not yet registeredPartners:Department of Plant Sciences, University of Saskatchewan, Canada Agriculture, Life Science, GeneticsDepartment of Plant Sciences, University of Saskatchewan, Canada
KnowPulse is a breeder-focused web portal that integrates genetics and genomics of pulse crops with model genomes.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS Comparative Genomics, Population Genetics, whole genome sequencing assayNGDC, CNCB / BIG, CAS
Virtual Chinese Genome Database (VCGDB) is a genome database of the Chinese population based on the whole genome sequencing data of 194 individuals. We are unsure when this database was last updated, and as such we have marked this record as Uncertain. Please contact us if you have any information on its current status.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Princess Margaret Cancer Centre Epigenomics, Bioinformatics, nucleotidePrincess Margaret Cancer Centre
re3data: r3d100013918
DNAmod is an open-source database (https://dnamod.hoffmanlab.org) that catalogues DNA modifications and provides a single source to learn about their properties. The database annotates the chemical properties and structures of all curated modified DNA bases, and a much larger list of candidate chemical entities. DNAmod includes manual annotations of available sequencing methods, descriptions of their occurrence in nature, and provides existing and suggested nomenclature. DNAmod enables researchers to rapidly review previous work, select mapping techniques, and track recent developments concerning modified bases of interest.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EMBL-EBI Genomics, Genetic Polymorphism, curated informationEMBL-EBI
re3data: r3d100010814
The Database of Genomic Variants archive (DGVa) is a repository that provides archiving, accessioning and distribution of publicly available genomic structural variants, in all species.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:NHLBI, Canada's Michael Smith Genome Sciences Centre, BC Cancer Foundation, Genome Canada, BCCA Life Sciences, Zoology, Animal Genetics, Cell and Developmental BiologyNHLBI,Canada's Michael Smith Genome Sciences Centre,BC Cancer Foundation,Genome Canada,BCCA
re3data: r3d100010645
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For further information contact us at helpdesk@openaire.eu - Data Repository Germany, Netherlands Compatibility:Not yet registeredPartners:CLARIN-D, University of Cologne, Data Center for the Humanities, CLARIN Humanities and Social Sciences, Linguistics, HumanitiesCLARIN-D,University of Cologne, Data Center for the Humanities,CLARIN
re3data: r3d100012786
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:CentERdata, DANS Humanities and Social Sciences, Social Sciences, Empirical Social ResearchCentERdata,DANS
re3data: r3d100011335
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:ECCC Natural Sciences, Atmospheric Science and Oceanography, Atmospheric ScienceECCC
re3data: r3d100012089
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:Tyler Technologies, Government of New Brunswick Humanities and Social Sciences, Life Sciences, Natural SciencesTyler Technologies,Government of New Brunswick
re3data: r3d100013946
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:University of Oxford Biotherapeutics, Structural Biology, immunoglobulin complex, circulatingUniversity of Oxford
The Therapeutic Structural Antibody Database tracks all antibody- and nanobody-related therapeutics recognized by the World Health Organisation (WHO), and identifies any corresponding structures in the Structural Antibody Database (SAbDab) with near-exact or exact variable domain sequence matches. Thera-SAbDab is synchronized with SAbDab to update weekly, reflecting new Protein Data Bank entries and the availability of new sequence data published by the WHO. Each therapeutic summary page lists structural coverage (with links to the appropriate SAbDab entries), alignments showing where any near-matches deviate in sequence, and accompanying metadata, such as intended target and investigated conditions. Thera-SAbDab can be queried by therapeutic name, by a combination of metadata, or by variable domain sequence - returning all therapeutics that are within a specified sequence identity over a specified region of the query. The sequences of all therapeutics listed in Thera-SAbDab are downloadable as a single file with accompanying metadata.
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