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- Data Repository France Compatibility:Not yet registeredPartners:MNHN Mineralogy, Biodiversity, BiologyMNHN
The National Inventory of Natural Heritage (INPN) is a repository for data needed for the development of conservation strategies and the dissemination of information as well as national and international reports relating to the French natural heritage (plant and animal species, natural habitats and geological heritage). It was created to provide a national reference bank for French biodiversity.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Benin Compatibility:Not yet registeredPartners:CGIAR, Africa Rice Center Donors, RICE CRP, WARDA Life Sciences, Agriculture, Forestry, Horticulture and Veterinary MedicineCGIAR,Africa Rice Center Donors,RICE CRP,WARDA
re3data: r3d100011251
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Spain Compatibility:Not yet registeredPartners:CNRS, IBE Taxonomy, Genetics, Taxonomic classificationCNRS,IBE
The PR2 reference sequence database began as part of the BioMarks project from previous work in the Plankton Group of the Station Biologique of Roscoff. It aims to provide a reference database of carefully annotated 18S rRNA sequences using nine unique taxonomic fields (from domain to species). At present, it contains over 240,000 sequences. Although it focuses on protists, it also contains sequences from metazoa, fungi and plants as well a limited set of 16S sequences from plastids and bacteria. Several metadata fields are available for many sequences, including geo-localisation, whether it originates from a culture or a natural sample, and host type. The annotation of PR2 is performed by experts in each of the taxonomic groups.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:GBIF France Life Science, Biodiversity, Taxonomic classificationGBIF France
GBIF France hosts this data repository on behalf of GBIF Guinea in collaboration with the GBIF Secretariat, built using an installation of the GBIF Integrated Publishing Toolkit (IPT). GBIF-GUINEE is established within the Centre d'Observation de Surveillance et d'Information Environnementales (COSIE) , the signatory of the GBIF Memorandum of Understanding, as a specialized team working on the collection of biodiversity occurrence data from data publishers to enable their publication on the Internet. The node of GBIF-GUINEE is mandated to collect species occurrence data on the national and international level in order to make these available to data users and decision makers. The data collected and disseminated by COSIE enable the generation of statistics to support decision making by authorities, in order to integrate ecological considerations into programmes and plans for the socio-economic development of Guniea. These ecological considerations have the goal of protection of the environment and biological diversity.
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For further information contact us at helpdesk@openaire.eu - Data Repository Austria, European Union Compatibility:Not yet registeredPartners:ICBI, APERIM, European Commission, HORIZON 2020 Life Sciences, Basic Biological and Medical Research, Microbiology, Virology and ImmunologyICBI,APERIM,European Commission, HORIZON 2020
re3data: r3d100012052
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:LPL Phylogeny, Metagenomics, GenomicsLPL
Ocean Gene Atlas(OGA) is a webservice to explore the biogeography of marine genes based on sequence similarity with environmental genomics datasets. OGA is currently implemented with the Tara Ocean Microbiome-Reference Gene Catalog database and the Marine Atlas of Tara Ocean Unigenes. Gene abundance estimates are computed for DNA metagenomes from the smallest Tara Oceans size fractions (from 0 to 3 µm, OM-RGC), and for RNA metatranscriptomes from Tara Oceans larger size fractions (0.8 to 2000µm, MATOU). OGA also includes curated Tara Oceans Eukaryotic Metagenome and Single-Cell Assembled Genomes (MAGs and SAGs), metagenomics-based transcriptomes (MGTs) and metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean (Arctic MAG+G).
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:ECRIN Clinical Studies, Electronic Health Record, intervention designECRIN
The clinical research Data Sharing Repository is capable of holding any type of digital object -data sets, documents, media file etc- in a secure research environment (TRE). The repository collects the metadata necessary for the Findability of the objects, promoting data sharing in clinical research.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository France Compatibility:Not yet registeredPartners:Université Claude Bernard Lyon 1Université Claude Bernard Lyon 1All Research products
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For further information contact us at helpdesk@openaire.eu - Data Repository European Union, Germany Compatibility:Not yet registeredPartners:DARIAH ERIC, Humanities Data Center Partner, BMBF, DARIAH-DE, Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek Humanities and Social Sciences, Fine Arts, Music, Theatre and Media Studies, HumanitiesDARIAH ERIC,Humanities Data Center Partner,BMBF,DARIAH-DE,Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek
The DARIAH-DE repository is a digital long-term archive for human and cultural-scientific research data. Each object described and stored in the DARIAH-DE Repository has a unique and lasting Persistent Identifier (DOI), with which it is permanently referenced, cited, and kept available for the long term. In addition, the DARIAH-DE Repository enables the sustainable and secure archiving of data collections. The DARIAH-DE Repository is not only to DARIAH-DE associated research projects, but also to individual researchers as well as research projects that want to save their research data persistently, referenceable and long-term archived and make it available to third parties. The main focus is the simple and user-oriented access to long-term storage of research data. To ensure its long term sustainability, the DARIAH-DE Repository is operated by the Humanities Data Centre.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:ICBMS Biology, Protein interactions, carbohydrateICBMS
re3data: r3d100010672
MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations. MatrixDB reports interactions with individual polypeptide chains or with multimers (e.g. collagens, laminins, thrombospondins) when appropriate. Multimers are treated as permanent complexes, referencing EBI identifiers when possible. Human interactions were inferred from non-human homologous interactions when available.
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- Data Repository France Compatibility:Not yet registeredPartners:MNHN Mineralogy, Biodiversity, BiologyMNHN
The National Inventory of Natural Heritage (INPN) is a repository for data needed for the development of conservation strategies and the dissemination of information as well as national and international reports relating to the French natural heritage (plant and animal species, natural habitats and geological heritage). It was created to provide a national reference bank for French biodiversity.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Benin Compatibility:Not yet registeredPartners:CGIAR, Africa Rice Center Donors, RICE CRP, WARDA Life Sciences, Agriculture, Forestry, Horticulture and Veterinary MedicineCGIAR,Africa Rice Center Donors,RICE CRP,WARDA
re3data: r3d100011251
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Spain Compatibility:Not yet registeredPartners:CNRS, IBE Taxonomy, Genetics, Taxonomic classificationCNRS,IBE
The PR2 reference sequence database began as part of the BioMarks project from previous work in the Plankton Group of the Station Biologique of Roscoff. It aims to provide a reference database of carefully annotated 18S rRNA sequences using nine unique taxonomic fields (from domain to species). At present, it contains over 240,000 sequences. Although it focuses on protists, it also contains sequences from metazoa, fungi and plants as well a limited set of 16S sequences from plastids and bacteria. Several metadata fields are available for many sequences, including geo-localisation, whether it originates from a culture or a natural sample, and host type. The annotation of PR2 is performed by experts in each of the taxonomic groups.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:GBIF France Life Science, Biodiversity, Taxonomic classificationGBIF France
GBIF France hosts this data repository on behalf of GBIF Guinea in collaboration with the GBIF Secretariat, built using an installation of the GBIF Integrated Publishing Toolkit (IPT). GBIF-GUINEE is established within the Centre d'Observation de Surveillance et d'Information Environnementales (COSIE) , the signatory of the GBIF Memorandum of Understanding, as a specialized team working on the collection of biodiversity occurrence data from data publishers to enable their publication on the Internet. The node of GBIF-GUINEE is mandated to collect species occurrence data on the national and international level in order to make these available to data users and decision makers. The data collected and disseminated by COSIE enable the generation of statistics to support decision making by authorities, in order to integrate ecological considerations into programmes and plans for the socio-economic development of Guniea. These ecological considerations have the goal of protection of the environment and biological diversity.
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For further information contact us at helpdesk@openaire.eu - Data Repository Austria, European Union Compatibility:Not yet registeredPartners:ICBI, APERIM, European Commission, HORIZON 2020 Life Sciences, Basic Biological and Medical Research, Microbiology, Virology and ImmunologyICBI,APERIM,European Commission, HORIZON 2020
re3data: r3d100012052
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:LPL Phylogeny, Metagenomics, GenomicsLPL
Ocean Gene Atlas(OGA) is a webservice to explore the biogeography of marine genes based on sequence similarity with environmental genomics datasets. OGA is currently implemented with the Tara Ocean Microbiome-Reference Gene Catalog database and the Marine Atlas of Tara Ocean Unigenes. Gene abundance estimates are computed for DNA metagenomes from the smallest Tara Oceans size fractions (from 0 to 3 µm, OM-RGC), and for RNA metatranscriptomes from Tara Oceans larger size fractions (0.8 to 2000µm, MATOU). OGA also includes curated Tara Oceans Eukaryotic Metagenome and Single-Cell Assembled Genomes (MAGs and SAGs), metagenomics-based transcriptomes (MGTs) and metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean (Arctic MAG+G).
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:ECRIN Clinical Studies, Electronic Health Record, intervention designECRIN
The clinical research Data Sharing Repository is capable of holding any type of digital object -data sets, documents, media file etc- in a secure research environment (TRE). The repository collects the metadata necessary for the Findability of the objects, promoting data sharing in clinical research.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository France Compatibility:Not yet registeredPartners:Université Claude Bernard Lyon 1Université Claude Bernard Lyon 1All Research products
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For further information contact us at helpdesk@openaire.eu - Data Repository European Union, Germany Compatibility:Not yet registeredPartners:DARIAH ERIC, Humanities Data Center Partner, BMBF, DARIAH-DE, Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek Humanities and Social Sciences, Fine Arts, Music, Theatre and Media Studies, HumanitiesDARIAH ERIC,Humanities Data Center Partner,BMBF,DARIAH-DE,Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek
The DARIAH-DE repository is a digital long-term archive for human and cultural-scientific research data. Each object described and stored in the DARIAH-DE Repository has a unique and lasting Persistent Identifier (DOI), with which it is permanently referenced, cited, and kept available for the long term. In addition, the DARIAH-DE Repository enables the sustainable and secure archiving of data collections. The DARIAH-DE Repository is not only to DARIAH-DE associated research projects, but also to individual researchers as well as research projects that want to save their research data persistently, referenceable and long-term archived and make it available to third parties. The main focus is the simple and user-oriented access to long-term storage of research data. To ensure its long term sustainability, the DARIAH-DE Repository is operated by the Humanities Data Centre.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:ICBMS Biology, Protein interactions, carbohydrateICBMS
re3data: r3d100010672
MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations. MatrixDB reports interactions with individual polypeptide chains or with multimers (e.g. collagens, laminins, thrombospondins) when appropriate. Multimers are treated as permanent complexes, referencing EBI identifiers when possible. Human interactions were inferred from non-human homologous interactions when available.
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