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- Institutional Repository Netherlands Compatibility:Not yet registeredPartners:University of GroningenUniversity of GroningenAll Research products
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For further information contact us at helpdesk@openaire.eu - Data Repository Spain, France Compatibility:Not yet registeredPartners:bioinsilico.org, SBI, LMGM Life Science, Secondary Protein Structure, Classificationbioinsilico.org,SBI,LMGM
ArchDB is a compilation of structural classifications of loops extracted from known protein structures. The structural classification is based on the geometry and conformation of the loop. The geometry is defined by four internal variables and the type of regular flanking secondary structures, resulting in 10 different loop types. Loops in ArchDB have been classified using an improved version (Espadaler et al.) of the original ArchType program published in 1997 by Oliva et al.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Spain Compatibility:Not yet registeredPartners:ULLULL
This site allows access to the special collections of the University of La Laguna library. The interface is available in English, French or Spanish, most content is Spanish only
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For further information contact us at helpdesk@openaire.eu - Data Repository Italy Compatibility:Not yet registeredPartners:ISTI-CNR Culture, History, data visualizationISTI-CNR
The aim of the Visual Media Service is to provide CH researchers with an automatic system to publish on the web, search, visualize and analyze images and 3D models in a common workspace, enabling sharing, interoperability and reuse of visual data. Visual Media Service enables the easy publication and visualization on the web of high-resolution 2D images, RTI (Reflection Transformation Images) and 3D models.
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For further information contact us at helpdesk@openaire.eu - Data Repository Spain Compatibility:Not yet registeredPartners:CIC bioGUNE, Innovation Technology Department of Bizkaia, Spain, University of Navarra Life Science, Protein interactions, protein secretionCIC bioGUNE,Innovation Technology Department of Bizkaia, Spain,University of Navarra
Vertebrate Secretome Database (VerSeDa) stores information about proteins that are predicted to be secreted through the classical and non-classical mechanisms, for the wide range of vertebrate species deposited at the NCBI, UCSC and ENSEMBL sites.
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For further information contact us at helpdesk@openaire.eu - Data Repository Italy Compatibility:Not yet registeredPartners:CIRMMP Structural Biology, Protein structure, ligandCIRMMP
MetalPDB is a resource aimed at conveying the information available on the three-dimensional structures of metal-binding biological macromolecules in a consistent and effective manner. This is achieved through the systematic and automated representation of metal-binding sites in proteins and nucleic acids by way of Minimal Functional Sites (MFSs). MFSs are three-dimensional templates that describe the local environment around the metal(s) independently of the larger context of the macromolecular structure embedding the site(s), and are the central objects of MetalPDB design. MFSs are grouped into equistructural (broadly defined as sites found in corresponding positions in similar structures) and equivalent sites (equistructural sites that contain the same metals), allowing users to easily analyze similarities and variations in metal-macromolecule interactions, and to link them to functional information.
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:Leiden University Life Science, Biomedical Science, ribonucleic acidLeiden University
re3data: r3d100010563
PseudoBase is a collection of RNA pseudoknots that have been made available for retrieval to the scientific community.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:OpenAIRE Basic (DRIVER OA)Partners:Naturalis Biodiversity CenterNaturalis Biodiversity CenterOAI-PMH URL: https://repository.naturalis.nl/oai
The Naturalis Repository provides access to staff publications and to Naturalis journals and series.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Spain Compatibility:OpenAIRE 2.0+ (DRIVER OA, EC funding)Partners:ULPGC MultidisciplinaryULPGCOAI-PMH URL: http://acceda.ulpgc.es/oai/driver
This site provides access to the output of the institution. The interface is in Spanish.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Austria Compatibility:Not yet registeredPartners:University of ViennaUniversity of Vienna
u:scholar is the University of Vienna's institutional repository where University affiliates can upload their journal articles, working papers, monographs, conference papers and other scholarly materials and make them openly available to others. The platform supports both secondary and primary publication. Documents uploaded to u:scholar are technically being stored in Phaidra where they are also being archived. If you want to try out u:scholar, you are welcome to test it using the u:scholar sandbox on Campus.
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- Institutional Repository Netherlands Compatibility:Not yet registeredPartners:University of GroningenUniversity of GroningenAll Research products
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For further information contact us at helpdesk@openaire.eu - Data Repository Spain, France Compatibility:Not yet registeredPartners:bioinsilico.org, SBI, LMGM Life Science, Secondary Protein Structure, Classificationbioinsilico.org,SBI,LMGM
ArchDB is a compilation of structural classifications of loops extracted from known protein structures. The structural classification is based on the geometry and conformation of the loop. The geometry is defined by four internal variables and the type of regular flanking secondary structures, resulting in 10 different loop types. Loops in ArchDB have been classified using an improved version (Espadaler et al.) of the original ArchType program published in 1997 by Oliva et al.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Spain Compatibility:Not yet registeredPartners:ULLULL
This site allows access to the special collections of the University of La Laguna library. The interface is available in English, French or Spanish, most content is Spanish only
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For further information contact us at helpdesk@openaire.eu - Data Repository Italy Compatibility:Not yet registeredPartners:ISTI-CNR Culture, History, data visualizationISTI-CNR
The aim of the Visual Media Service is to provide CH researchers with an automatic system to publish on the web, search, visualize and analyze images and 3D models in a common workspace, enabling sharing, interoperability and reuse of visual data. Visual Media Service enables the easy publication and visualization on the web of high-resolution 2D images, RTI (Reflection Transformation Images) and 3D models.
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For further information contact us at helpdesk@openaire.eu - Data Repository Spain Compatibility:Not yet registeredPartners:CIC bioGUNE, Innovation Technology Department of Bizkaia, Spain, University of Navarra Life Science, Protein interactions, protein secretionCIC bioGUNE,Innovation Technology Department of Bizkaia, Spain,University of Navarra
Vertebrate Secretome Database (VerSeDa) stores information about proteins that are predicted to be secreted through the classical and non-classical mechanisms, for the wide range of vertebrate species deposited at the NCBI, UCSC and ENSEMBL sites.
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For further information contact us at helpdesk@openaire.eu - Data Repository Italy Compatibility:Not yet registeredPartners:CIRMMP Structural Biology, Protein structure, ligandCIRMMP
MetalPDB is a resource aimed at conveying the information available on the three-dimensional structures of metal-binding biological macromolecules in a consistent and effective manner. This is achieved through the systematic and automated representation of metal-binding sites in proteins and nucleic acids by way of Minimal Functional Sites (MFSs). MFSs are three-dimensional templates that describe the local environment around the metal(s) independently of the larger context of the macromolecular structure embedding the site(s), and are the central objects of MetalPDB design. MFSs are grouped into equistructural (broadly defined as sites found in corresponding positions in similar structures) and equivalent sites (equistructural sites that contain the same metals), allowing users to easily analyze similarities and variations in metal-macromolecule interactions, and to link them to functional information.
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:Leiden University Life Science, Biomedical Science, ribonucleic acidLeiden University
re3data: r3d100010563
PseudoBase is a collection of RNA pseudoknots that have been made available for retrieval to the scientific community.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:OpenAIRE Basic (DRIVER OA)Partners:Naturalis Biodiversity CenterNaturalis Biodiversity CenterOAI-PMH URL: https://repository.naturalis.nl/oai
The Naturalis Repository provides access to staff publications and to Naturalis journals and series.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Spain Compatibility:OpenAIRE 2.0+ (DRIVER OA, EC funding)Partners:ULPGC MultidisciplinaryULPGCOAI-PMH URL: http://acceda.ulpgc.es/oai/driver
This site provides access to the output of the institution. The interface is in Spanish.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Austria Compatibility:Not yet registeredPartners:University of ViennaUniversity of Vienna
u:scholar is the University of Vienna's institutional repository where University affiliates can upload their journal articles, working papers, monographs, conference papers and other scholarly materials and make them openly available to others. The platform supports both secondary and primary publication. Documents uploaded to u:scholar are technically being stored in Phaidra where they are also being archived. If you want to try out u:scholar, you are welcome to test it using the u:scholar sandbox on Campus.
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