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- Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:Carlos III University of Madrid MultidisciplinaryCarlos III University of MadridOAI-PMH URL: https://e-archivo.uc3m.es/dspace-oai/request
This site is an institutional repository providing access to materials produced by the members of the university. The site is supported with background information on Open Access in general, and publisher copyright issues in particular. Registered users on the site can set up email alerts, to notify them of newly added relevant content. The interface is available in Spanish and English.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Department of Plant Sciences, University of Saskatchewan, Canada Agriculture, Life Science, GeneticsDepartment of Plant Sciences, University of Saskatchewan, Canada
KnowPulse is a breeder-focused web portal that integrates genetics and genomics of pulse crops with model genomes.
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For further information contact us at helpdesk@openaire.eu - Data Repository Spain Compatibility:Not yet registeredPartners:IBI Life Science, Human Genetics, Biomedical ScienceIBI
re3data: r3d100013301
DisGeNET is a discovery platform containing one of the largest collections available of genes and variants involved in human diseases. DisGeNET integrates data from expert curated repositories, GWAS catalogues, animal models, and the scientific literature, and covers the whole landscape of human diseases. The current version of DisGeNET (v7.0) contains 1,134,942 gene-disease associations (GDAs), between 21,671 genes and 30,170 diseases, disorders, traits, and clinical or abnormal human phenotypes, and 369,554 variant-disease associations (VDAs), between 194,515 variants and 14,155 diseases, traits, and phenotypes. The data are homogeneously annotated with controlled vocabularies and community-driven ontologies. Additionally, several original metrics are provided to assist the prioritization of genotype-phenotype relationships. The information is accessible through a web interface, a Cytoscape App, an RDF SPARQL endpoint, a REST API, and an R package.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS Comparative Genomics, Population Genetics, whole genome sequencing assayNGDC, CNCB / BIG, CAS
Virtual Chinese Genome Database (VCGDB) is a genome database of the Chinese population based on the whole genome sequencing data of 194 individuals. We are unsure when this database was last updated, and as such we have marked this record as Uncertain. Please contact us if you have any information on its current status.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Princess Margaret Cancer Centre Epigenomics, Bioinformatics, nucleotidePrincess Margaret Cancer Centre
re3data: r3d100013918
DNAmod is an open-source database (https://dnamod.hoffmanlab.org) that catalogues DNA modifications and provides a single source to learn about their properties. The database annotates the chemical properties and structures of all curated modified DNA bases, and a much larger list of candidate chemical entities. DNAmod includes manual annotations of available sequencing methods, descriptions of their occurrence in nature, and provides existing and suggested nomenclature. DNAmod enables researchers to rapidly review previous work, select mapping techniques, and track recent developments concerning modified bases of interest.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:NHLBI, Canada's Michael Smith Genome Sciences Centre, BC Cancer Foundation, Genome Canada, BCCA Life Sciences, Zoology, Animal Genetics, Cell and Developmental BiologyNHLBI,Canada's Michael Smith Genome Sciences Centre,BC Cancer Foundation,Genome Canada,BCCA
re3data: r3d100010645
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:University of Huelva MultidisciplinaryUniversity of HuelvaOAI-PMH URL: http://rabida.uhu.es/oai/driver
This site is an institutional repository which provides open access to the publications produced by the members of the University. The interface is in Spanish.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:ECCC Natural Sciences, Atmospheric Science and Oceanography, Atmospheric ScienceECCC
re3data: r3d100012089
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:Tyler Technologies, Government of New Brunswick Humanities and Social Sciences, Life Sciences, Natural SciencesTyler Technologies,Government of New Brunswick
re3data: r3d100013946
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For further information contact us at helpdesk@openaire.eu - Data Repository Spain Compatibility:Not yet registeredPartners:PRBB Life Science, Proteomics, AnnotationPRBB
FCP is a publicly accessible web tool dedicated to analysing the current state and trends on the population of available structures along the classification schemes of enzymes and nuclear receptors, offering both graphical and quantitative data on the degree of functional coverage in that portion of the proteome by existing structures, as well as on the bias observed in the distribution of those structures among proteins.
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- Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:Carlos III University of Madrid MultidisciplinaryCarlos III University of MadridOAI-PMH URL: https://e-archivo.uc3m.es/dspace-oai/request
This site is an institutional repository providing access to materials produced by the members of the university. The site is supported with background information on Open Access in general, and publisher copyright issues in particular. Registered users on the site can set up email alerts, to notify them of newly added relevant content. The interface is available in Spanish and English.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::2a9d121cd9c3a1832bb6d2cc6bd7a8a7&type=result"></script>'); --> </script>
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Department of Plant Sciences, University of Saskatchewan, Canada Agriculture, Life Science, GeneticsDepartment of Plant Sciences, University of Saskatchewan, Canada
KnowPulse is a breeder-focused web portal that integrates genetics and genomics of pulse crops with model genomes.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.23b5c8&type=result"></script>'); --> </script>
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For further information contact us at helpdesk@openaire.eu - Data Repository Spain Compatibility:Not yet registeredPartners:IBI Life Science, Human Genetics, Biomedical ScienceIBI
re3data: r3d100013301
DisGeNET is a discovery platform containing one of the largest collections available of genes and variants involved in human diseases. DisGeNET integrates data from expert curated repositories, GWAS catalogues, animal models, and the scientific literature, and covers the whole landscape of human diseases. The current version of DisGeNET (v7.0) contains 1,134,942 gene-disease associations (GDAs), between 21,671 genes and 30,170 diseases, disorders, traits, and clinical or abnormal human phenotypes, and 369,554 variant-disease associations (VDAs), between 194,515 variants and 14,155 diseases, traits, and phenotypes. The data are homogeneously annotated with controlled vocabularies and community-driven ontologies. Additionally, several original metrics are provided to assist the prioritization of genotype-phenotype relationships. The information is accessible through a web interface, a Cytoscape App, an RDF SPARQL endpoint, a REST API, and an R package.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS Comparative Genomics, Population Genetics, whole genome sequencing assayNGDC, CNCB / BIG, CAS
Virtual Chinese Genome Database (VCGDB) is a genome database of the Chinese population based on the whole genome sequencing data of 194 individuals. We are unsure when this database was last updated, and as such we have marked this record as Uncertain. Please contact us if you have any information on its current status.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Princess Margaret Cancer Centre Epigenomics, Bioinformatics, nucleotidePrincess Margaret Cancer Centre
re3data: r3d100013918
DNAmod is an open-source database (https://dnamod.hoffmanlab.org) that catalogues DNA modifications and provides a single source to learn about their properties. The database annotates the chemical properties and structures of all curated modified DNA bases, and a much larger list of candidate chemical entities. DNAmod includes manual annotations of available sequencing methods, descriptions of their occurrence in nature, and provides existing and suggested nomenclature. DNAmod enables researchers to rapidly review previous work, select mapping techniques, and track recent developments concerning modified bases of interest.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:NHLBI, Canada's Michael Smith Genome Sciences Centre, BC Cancer Foundation, Genome Canada, BCCA Life Sciences, Zoology, Animal Genetics, Cell and Developmental BiologyNHLBI,Canada's Michael Smith Genome Sciences Centre,BC Cancer Foundation,Genome Canada,BCCA
re3data: r3d100010645
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:University of Huelva MultidisciplinaryUniversity of HuelvaOAI-PMH URL: http://rabida.uhu.es/oai/driver
This site is an institutional repository which provides open access to the publications produced by the members of the University. The interface is in Spanish.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:ECCC Natural Sciences, Atmospheric Science and Oceanography, Atmospheric ScienceECCC
re3data: r3d100012089
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:Tyler Technologies, Government of New Brunswick Humanities and Social Sciences, Life Sciences, Natural SciencesTyler Technologies,Government of New Brunswick
re3data: r3d100013946
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For further information contact us at helpdesk@openaire.eu - Data Repository Spain Compatibility:Not yet registeredPartners:PRBB Life Science, Proteomics, AnnotationPRBB
FCP is a publicly accessible web tool dedicated to analysing the current state and trends on the population of available structures along the classification schemes of enzymes and nuclear receptors, offering both graphical and quantitative data on the degree of functional coverage in that portion of the proteome by existing structures, as well as on the bias observed in the distribution of those structures among proteins.
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