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2,111 Data sources

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  • Curated repository for small angle scattering data and models. SASBDB contains X-ray (SAXS) and neutron (SANS) scattering data from biological macromolecules in solution.

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  • IndExs is a database comprising information on exsiccatae (=exsiccatal series) with titles, abbreviations, bibliography and provides a unique and persistent Exsiccata ID for each series. Exsiccatae are defined as "published, uniform, numbered sets of preserved specimens distributed with printed labels" (Pfister 1985). Please note that there are two similar latin terms: "exsiccata, ae" is feminine and used for a set of dried specimens as defined above, whereas the term "exsiccatum, i" is neutral and used for dried specimens in general. If available, images of one or more examplary labels are added to give layout information. IndExs is powered by the Diversity Workbench database framework.

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  • European Spallation Source (ESS) Data Catalogue, SciCat instance

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  • This site is a university repository providing access to the publication output of the institution. The site is well supported with background information which is in German and English. All items are available via Open Access. Some items may be restricted by an embargo and are therefor only available as metadata (bibliographic record) entries for some time. Users might contact the author for permission to access the items in the embargo period.

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  • The ICI Berlin Repository is a multi-disciplinary open access archive for the dissemination of scientific research documents related to the ICI Berlin, whether they are originally published by the ICI Berlin or elsewhere.

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  • This repository is currently limited to preprints related to the Beilstein Journal of Nanotechnology and the Beilstein Journal of Organic Chemistry. All preprints are posted with a CC-BY 4.0 license.

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  • SABIO-RK is a database for biochemical reactions, their kinetic equations with their parameters, and the experimental conditions under which these parameters were measured.

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  • The Eukaryotic Promoter Database (EPD) provides accurate transcription start site (TSS) information for promoters of 15 model organisms, from human to yeast to the malaria parasite Plasmodium falciparum. While the original database was a manually curated database based on published experiments, new promoter collections are now produced entirely automatically (under the name “EPDnew”) based on high-throughput transcript mapping data and high-quality gene annotation resources. Corresponding functional genomics data can be viewed in a genome browser, queried or analyzed via web interfaces, or exported in standard formats like FASTA or BED for subsequent analysis with other tools; of note, EPD is tightly integrated with two tool suites developed by our group: ChIP-Seq and Signal Search Analysis, for analysis of chromatin context and sequence motif respectively. EPD provides promoter viewers, designed with the aim of integrating and displaying information from different sources about, for instance, histone marks, transcription factor-binding sites or SNPs with known phenotypes. These viewers rely upon the UCSC genome browser as a visualization platform, which enables users to view data tracks from EPD jointly with tracks from UCSC or public track hubs.

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2,111 Data sources
  • more_vert
  • Curated repository for small angle scattering data and models. SASBDB contains X-ray (SAXS) and neutron (SANS) scattering data from biological macromolecules in solution.

    more_vert
  • IndExs is a database comprising information on exsiccatae (=exsiccatal series) with titles, abbreviations, bibliography and provides a unique and persistent Exsiccata ID for each series. Exsiccatae are defined as "published, uniform, numbered sets of preserved specimens distributed with printed labels" (Pfister 1985). Please note that there are two similar latin terms: "exsiccata, ae" is feminine and used for a set of dried specimens as defined above, whereas the term "exsiccatum, i" is neutral and used for dried specimens in general. If available, images of one or more examplary labels are added to give layout information. IndExs is powered by the Diversity Workbench database framework.

    more_vert
  • European Spallation Source (ESS) Data Catalogue, SciCat instance

    more_vert
  • This site is a university repository providing access to the publication output of the institution. The site is well supported with background information which is in German and English. All items are available via Open Access. Some items may be restricted by an embargo and are therefor only available as metadata (bibliographic record) entries for some time. Users might contact the author for permission to access the items in the embargo period.

    more_vert
  • The ICI Berlin Repository is a multi-disciplinary open access archive for the dissemination of scientific research documents related to the ICI Berlin, whether they are originally published by the ICI Berlin or elsewhere.

    more_vert
  • This repository is currently limited to preprints related to the Beilstein Journal of Nanotechnology and the Beilstein Journal of Organic Chemistry. All preprints are posted with a CC-BY 4.0 license.

    more_vert
  • SABIO-RK is a database for biochemical reactions, their kinetic equations with their parameters, and the experimental conditions under which these parameters were measured.

    more_vert
  • more_vert
  • The Eukaryotic Promoter Database (EPD) provides accurate transcription start site (TSS) information for promoters of 15 model organisms, from human to yeast to the malaria parasite Plasmodium falciparum. While the original database was a manually curated database based on published experiments, new promoter collections are now produced entirely automatically (under the name “EPDnew”) based on high-throughput transcript mapping data and high-quality gene annotation resources. Corresponding functional genomics data can be viewed in a genome browser, queried or analyzed via web interfaces, or exported in standard formats like FASTA or BED for subsequent analysis with other tools; of note, EPD is tightly integrated with two tool suites developed by our group: ChIP-Seq and Signal Search Analysis, for analysis of chromatin context and sequence motif respectively. EPD provides promoter viewers, designed with the aim of integrating and displaying information from different sources about, for instance, histone marks, transcription factor-binding sites or SNPs with known phenotypes. These viewers rely upon the UCSC genome browser as a visualization platform, which enables users to view data tracks from EPD jointly with tracks from UCSC or public track hubs.

    more_vert
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