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- Data Repository United States, Pakistan Compatibility:Not yet registeredPartners:University of Wisconsin–Oshkosh, WSU, NIH, Labkey, WNPRC Life Sciences, Basic Biological and Medical Research, General GeneticsUniversity of Wisconsin–Oshkosh,WSU,NIH,Labkey,WNPRC
re3data: r3d100012059
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re3data: r3d100013386
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MetaNetX/MNXref is a database for reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks. The tools developed at MetaNetX are useful for accessing, analysing and manipulating metabolic networks. MetaNetX goal is to automate model construction and genome annotation for large-scale metabolic networks.
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland Compatibility:Not yet registeredPartners:CHUV, Federal Office of Public Health, USZ, FNS Life Sciences, Microbiology, Virology and Immunology, VirologyCHUV,Federal Office of Public Health,USZ,FNS
re3data: r3d100011850
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The Pathway Interaction Database is a highly-structured, curated collection of information about known biomolecular interactions and key cellular processes assembled into signaling pathways.
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland, Germany Compatibility:Not yet registeredPartners:RISM Digital Center, SPK, BSB, AdW, RISM Zentralredaktion +1 partners Humanities and Social Sciences, Fine Arts, Music, Theatre and Media Studies, MusicologyRISM Digital Center,SPK,BSB,AdW,RISM Zentralredaktion,RISM Editorial Center
re3data: r3d100013190
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland Compatibility:Not yet registeredPartners:FORS, EPFZ, UNIBAS Humanities and Social Sciences, Humanities, Social SciencesFORS,EPFZ,UNIBAS
re3data: r3d100011939
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland Compatibility:Not yet registeredPartners:UZH Life Science, Biochemistry, Atomic coordinateUZH
MINAS contains the exact geometric information on the first and second-shell coordinating ligands of every metal ion present in nucleic acid structures that are deposited in the PDB and NDB. Containing also the sequence information of the binding pocket-proximal nucleotides, this database allows for a detailed search of all combinations of potential ligands and of coordination environments of metal ions. MINAS is therefore a perfect new tool to classify metal ion binding pockets in nucleic acids by statistics and to draw general conclusions about the different coordination properties of these ions. This record has been marked as Uncertain because the homepage for this resource is no longer active, and we have not been able to get in touch with the owners of the resource. Please contact us if you have any information regarding MINAS.
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland Compatibility:Not yet registeredPartners:Plazi GmbH Phylogeny, Biodiversity, Taxonomic classificationPlazi GmbH
The Biodiversity Literature Repository (BLR) is a research infrastructure (RI) comprising the BLR Community on Zenodo at the European Center for Nuclear Research (CERN), and services to search and retrieve the data (Ocellus, Zenodeo API, BLR website). BLR’s focus is on biodiversity data liberated from scholarly publications, and it uses custom metadata linking to external vocabularies covering the needs of the biodiversity community. This includes taxonomic treatment or figures as well as the deposit of the original article annotated with metadata describing the data contained in the articles itself, as well as related identifiers for figures and and treatments therein. The main data import is through TreatmentBank or via publishers such as Pensoft. With over 650,000 deposits, BLR is the single largest community in Zenodo. It’s data is widely reused, for example by the Global Biodiversity Information Facility (GBIF). All data in BLR is published under the CC0 Public Domain Dedication, remaining free for anyone to use, anywhere, for any purpose. Note from the FAIRsharing team: we have classified the status of the resource as 'uncertain' because the content of the database is no longer accessible. We are making every effort to engage with the resource owners to understand if it is a temporary issue or if the resource is no longer active.
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re3data: r3d100012277
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- Data Repository United States, Pakistan Compatibility:Not yet registeredPartners:University of Wisconsin–Oshkosh, WSU, NIH, Labkey, WNPRC Life Sciences, Basic Biological and Medical Research, General GeneticsUniversity of Wisconsin–Oshkosh,WSU,NIH,Labkey,WNPRC
re3data: r3d100012059
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland, European Union Compatibility:Not yet registeredPartners:EWC, European Union, Horizon 2020, ACEnano Project Engineering Sciences, Materials Science, Materials Science and EngineeringEWC,European Union, Horizon 2020,ACEnano Project
re3data: r3d100013386
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland Compatibility:Not yet registeredPartners:SIB Cheminformatics, Systems Biology, BiochemistrySIB
MetaNetX/MNXref is a database for reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks. The tools developed at MetaNetX are useful for accessing, analysing and manipulating metabolic networks. MetaNetX goal is to automate model construction and genome annotation for large-scale metabolic networks.
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland Compatibility:Not yet registeredPartners:CHUV, Federal Office of Public Health, USZ, FNS Life Sciences, Microbiology, Virology and Immunology, VirologyCHUV,Federal Office of Public Health,USZ,FNS
re3data: r3d100011850
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The Pathway Interaction Database is a highly-structured, curated collection of information about known biomolecular interactions and key cellular processes assembled into signaling pathways.
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re3data: r3d100013190
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland Compatibility:Not yet registeredPartners:FORS, EPFZ, UNIBAS Humanities and Social Sciences, Humanities, Social SciencesFORS,EPFZ,UNIBAS
re3data: r3d100011939
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland Compatibility:Not yet registeredPartners:UZH Life Science, Biochemistry, Atomic coordinateUZH
MINAS contains the exact geometric information on the first and second-shell coordinating ligands of every metal ion present in nucleic acid structures that are deposited in the PDB and NDB. Containing also the sequence information of the binding pocket-proximal nucleotides, this database allows for a detailed search of all combinations of potential ligands and of coordination environments of metal ions. MINAS is therefore a perfect new tool to classify metal ion binding pockets in nucleic acids by statistics and to draw general conclusions about the different coordination properties of these ions. This record has been marked as Uncertain because the homepage for this resource is no longer active, and we have not been able to get in touch with the owners of the resource. Please contact us if you have any information regarding MINAS.
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland Compatibility:Not yet registeredPartners:Plazi GmbH Phylogeny, Biodiversity, Taxonomic classificationPlazi GmbH
The Biodiversity Literature Repository (BLR) is a research infrastructure (RI) comprising the BLR Community on Zenodo at the European Center for Nuclear Research (CERN), and services to search and retrieve the data (Ocellus, Zenodeo API, BLR website). BLR’s focus is on biodiversity data liberated from scholarly publications, and it uses custom metadata linking to external vocabularies covering the needs of the biodiversity community. This includes taxonomic treatment or figures as well as the deposit of the original article annotated with metadata describing the data contained in the articles itself, as well as related identifiers for figures and and treatments therein. The main data import is through TreatmentBank or via publishers such as Pensoft. With over 650,000 deposits, BLR is the single largest community in Zenodo. It’s data is widely reused, for example by the Global Biodiversity Information Facility (GBIF). All data in BLR is published under the CC0 Public Domain Dedication, remaining free for anyone to use, anywhere, for any purpose. Note from the FAIRsharing team: we have classified the status of the resource as 'uncertain' because the content of the database is no longer accessible. We are making every effort to engage with the resource owners to understand if it is a temporary issue or if the resource is no longer active.
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For further information contact us at helpdesk@openaire.eu - Data Repository Switzerland, United States Compatibility:Not yet registeredPartners:EPFZ, ISB Life Sciences, Basic Biological and Medical Research, BiologyEPFZ,ISB
re3data: r3d100012277
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