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- Thematic Repository Austria Compatibility:Not yet registeredPartners:BBMRI-ERICBBMRI-ERIC
The BBMRI-ERIC CRC-Cohort is a large, retrospective, multi-center cohort study that aims to facilitate research on novel biomarkers for the early detection, prognosis, and treatment of colorectal cancer (CRC). The cohort is composed of 10,792 individuals with a confirmed diagnosis of CRC and comprehensive data and biological material available for research purposes. The cohort has broad European coverage with 26 contributing biobanks from 12 countries. A medium-depth phenotypical/clinical data model has been defined and patient-level data have been collected centrally at BBMRI-ERIC, with additional rich data and biological material hosted in the contributing biobanks. The BBMRI-ERIC biobanks have been used to ensure the highest quality biospecimens and data. The cohort data includes digital scans of histopathological slides to support research in artificial intelligence in digital pathology.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=eosc________::b55b8a37d793661b4c068bde59a54697&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=eosc________::b55b8a37d793661b4c068bde59a54697&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository Pakistan, Austria, United States Compatibility:Not yet registeredPartners:NIH, Medical University of Graz, NCBI, HHSD, NLM Life Sciences, Microbiology, Virology and Immunology, ImmunologyNIH,Medical University of Graz,NCBI,HHSD,NLM
re3data: r3d100010881
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JKU ePub is the Institutional Repository of Johannes Kepler University Linz.
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re3data: r3d100014179
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This site is a repository providing access to the publication output of the organisation. Not all items are available with open access, but those that are can be found easily by checking the Open Access check box. The main site interface is available in English or German, however the supporting information and help is in the latter only.
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IRIHS is a digital archive of research and enterprise output produced by the Institute for Advanced Studies.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::664dd858db942cad06f24ff25df56716&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::664dd858db942cad06f24ff25df56716&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository Austria Compatibility:Not yet registeredPartners:University of Vienna, Department of Microbiology and Ecosystem Science, Austria Life Science, Microbiology, PCR primersUniversity of Vienna, Department of Microbiology and Ecosystem Science, Austria
probeBase is a manually maintained and curated database of rRNA-targeted oligonucleotide probes and primers. Contextual information and multiple options for evaluating in silico hybridization performance against the most recent rRNA sequence databases are provided for each oligonucleotide entry, which makes probeBase an important and frequently used resource for microbiology research and diagnostics. The major features of probeBase include a classification of probes and primers according to the NCBI taxonomy database, a powerful and customizable search function, which serves to query for target organisms, probe names, primers, target sites, and references. The probeBase match tool can be used to match near-full length rRNA sequences against probeBase and find all published probes targeting the query sequences. The new proxy match tool extends this analysis to partial rRNA sequences, which exploits full-length sequences in the rRNA sequence database SILVA to find published probes potentially targeting partial query sequences. A tool for submitting new or missing probe sequences or references helps to keep probeBase up-to-date.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.t6wjn7&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.t6wjn7&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu
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- Thematic Repository Austria Compatibility:Not yet registeredPartners:BBMRI-ERICBBMRI-ERIC
The BBMRI-ERIC CRC-Cohort is a large, retrospective, multi-center cohort study that aims to facilitate research on novel biomarkers for the early detection, prognosis, and treatment of colorectal cancer (CRC). The cohort is composed of 10,792 individuals with a confirmed diagnosis of CRC and comprehensive data and biological material available for research purposes. The cohort has broad European coverage with 26 contributing biobanks from 12 countries. A medium-depth phenotypical/clinical data model has been defined and patient-level data have been collected centrally at BBMRI-ERIC, with additional rich data and biological material hosted in the contributing biobanks. The BBMRI-ERIC biobanks have been used to ensure the highest quality biospecimens and data. The cohort data includes digital scans of histopathological slides to support research in artificial intelligence in digital pathology.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=eosc________::b55b8a37d793661b4c068bde59a54697&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=eosc________::b55b8a37d793661b4c068bde59a54697&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository Pakistan, Austria, United States Compatibility:Not yet registeredPartners:NIH, Medical University of Graz, NCBI, HHSD, NLM Life Sciences, Microbiology, Virology and Immunology, ImmunologyNIH,Medical University of Graz,NCBI,HHSD,NLM
re3data: r3d100010881
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JKU ePub is the Institutional Repository of Johannes Kepler University Linz.
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re3data: r3d100014179
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This site is a repository providing access to the publication output of the organisation. Not all items are available with open access, but those that are can be found easily by checking the Open Access check box. The main site interface is available in English or German, however the supporting information and help is in the latter only.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::39461a19e9eddfb385ea76b26521ea48&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::39461a19e9eddfb385ea76b26521ea48&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository Georgia Compatibility:Not yet registeredPartners:UGUGAll Research products
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IRIHS is a digital archive of research and enterprise output produced by the Institute for Advanced Studies.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::664dd858db942cad06f24ff25df56716&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::664dd858db942cad06f24ff25df56716&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository Austria Compatibility:Not yet registeredPartners:University of Vienna, Department of Microbiology and Ecosystem Science, Austria Life Science, Microbiology, PCR primersUniversity of Vienna, Department of Microbiology and Ecosystem Science, Austria
probeBase is a manually maintained and curated database of rRNA-targeted oligonucleotide probes and primers. Contextual information and multiple options for evaluating in silico hybridization performance against the most recent rRNA sequence databases are provided for each oligonucleotide entry, which makes probeBase an important and frequently used resource for microbiology research and diagnostics. The major features of probeBase include a classification of probes and primers according to the NCBI taxonomy database, a powerful and customizable search function, which serves to query for target organisms, probe names, primers, target sites, and references. The probeBase match tool can be used to match near-full length rRNA sequences against probeBase and find all published probes targeting the query sequences. The new proxy match tool extends this analysis to partial rRNA sequences, which exploits full-length sequences in the rRNA sequence database SILVA to find published probes potentially targeting partial query sequences. A tool for submitting new or missing probe sequences or references helps to keep probeBase up-to-date.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.t6wjn7&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.t6wjn7&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu
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