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  • SDSN - Greece
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Amr Alanwar; Jagat Jyoti Rath; Hazem Said; Karl Henrik Johansson; +1 Authors

    We propose two distributed set-based observers using strip-based and set-propagation approaches for linear discrete-time dynamical systems with bounded modeling and measurement uncertainties. Both algorithms utilize a set-based diffusion step, which decreases the estimation errors and the size of estimated sets, and can be seen as a lightweight approach to achieve partial consensus between the distributed estimated sets. Every node shares its measurement with its neighbor in the measurement update step. In the diffusion step, the neighbors intersect their estimated sets using our novel lightweight zonotope intersection technique. A localization example demonstrates the applicability of our algorithms. Comment: Accepted at Journal of the Franklin Institute

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    arXiv.org e-Print Archive
    Other literature type . Preprint . 2020
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    Journal of the Franklin Institute
    Article . 2023 . Peer-reviewed
    License: CC BY
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    https://doi.org/10.48550/arxiv...
    Article . 2020
    License: arXiv Non-Exclusive Distribution
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ MediaTUMarrow_drop_down
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      Other literature type . Preprint . 2020
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      Journal of the Franklin Institute
      Article . 2023 . Peer-reviewed
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      https://doi.org/10.48550/arxiv...
      Article . 2020
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Amr Alanwar; Victor Gaßmann; Xingkang He; Hazem Said; +3 Authors

    The set-based estimation has gained a lot of attention due to its ability to guarantee state enclosures for safety-critical systems. However, collecting measurements from distributed sensors often requires outsourcing the set-based operations to an aggregator node, raising many privacy concerns. To address this problem, we present set-based estimation protocols using partially homomorphic encryption that preserve the privacy of the measurements and sets bounding the estimates. We consider a linear discrete-time dynamical system with bounded modeling and measurement uncertainties. Sets are represented by zonotopes and constrained zonotopes as they can compactly represent high-dimensional sets and are closed under linear maps and Minkowski addition. By selectively encrypting parameters of the set representations, we establish the notion of encrypted sets and intersect sets in the encrypted domain, which enables guaranteed state estimation while ensuring privacy. In particular, we show that our protocols achieve computational privacy using the cryptographic notion of computational indistinguishability. We demonstrate the efficiency of our approach by localizing a real mobile quadcopter using ultra-wideband wireless devices. Comment: This paper is accepted at the European Journal of Control

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    ZENODO; European Journal of Control
    Article . 2023 . Peer-reviewed
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    arXiv.org e-Print Archive
    Other literature type . Preprint . 2020
    https://doi.org/10.48550/arxiv...
    Article . 2020
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODO; European Jou...arrow_drop_down
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      Article . 2023 . Peer-reviewed
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      arXiv.org e-Print Archive
      Other literature type . Preprint . 2020
      https://doi.org/10.48550/arxiv...
      Article . 2020
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Peña-Angulo, null; Vicente-Serrano, null; Domínguez-Castro, null; Lorenzo-Lacruz, null; +16 Authors

    This study presents a new data set of gauged streamflow (N = 3,224) for Europe spanning the period 1962-2017. The Monthly Streamflow of Europe Dataset (MSED) is freely available at http://msed.csic.es/. Based on this data set, changes in the characteristics of hydrological drought (i.e., frequency, duration, and severity) were assessed for different regions of Europe. Due to the density of the database, it is possible to delimit spatial patterns in hydrological droughts trend with the greatest detail available to date. Results reveal bidirectional changes in monthly streamflow, with negative changes predominating over central and southern Europe, while positive trends dominate over northern Europe. Temporally, two dominant patterns were noted. The first pattern corresponds to a consistent downward trend in all months, evident for southern Europe. A second pattern was noted over central and northern Europe and western France, with a predominant negative trend during warm months and a positive trend in cold months. For hydrological drought events, results suggest a positive trend toward more frequent and severe droughts in southern and central Europe and conversely a negative trend over northern Europe. This study emphasizes that hydrological droughts show complex spatial patterns across Europe over the past six decades, implying that hydrological drought behavior in Europe has a regional character. Accordingly it is challenging to adopt "efficient" strategies and policies to monitor and mitigate drought impacts at the continental level. International audience

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    Water Resources Research
    Article . 2022 . Peer-reviewed
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    Authors: J. Peter W. Young; Sara Moeskjær; Alexey M. Afonin; Praveen Rahi; +22 Authors

    Bacteria currently included in Rhizobium leguminosarum are too diverse to be considered a single species, so we can refer to this as a species complex (the Rlc). We have found 429 publicly available genome sequences that fall within the Rlc and these show that the Rlc is a distinct entity, well separated from other species in the genus. Its sister taxon is R. anhuiense. We constructed a phylogeny based on concatenated sequences of 120 universal (core) genes, and calculated pairwise average nucleotide identity (ANI) between all genomes. From these analyses, we concluded that the Rlc includes 18 distinct genospecies, plus 7 unique strains that are not placed in these genospecies. Each genospecies is separated by a distinct gap in ANI values, usually at approximately 96% ANI, implying that it is a &lsquo and R. leguminosarum itself. The 16S ribosomal RNA sequence is remarkably diverse within the Rlc, but does not distinguish the genospecies. Partial sequences of housekeeping genes, which have frequently been used to characterize isolate collections, can mostly be assigned unambiguously to a genospecies, but alleles within a genospecies do not always form a clade, so single genes are not a reliable guide to the true phylogeny of the strains. We conclude that access to a large number of genome sequences is a powerful tool for characterizing the diversity of bacteria, and that taxonomic conclusions should be based on all available genome sequences, not just those of type strains. unit. Five of the genospecies include the type strains of named species: R. laguerreae, R. sophorae, R. ruizarguesonis, &ldquo R. indicum&rdquo natural&rsquo

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    Other literature type . Article . 2021 . Peer-reviewed
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    https://doi.org/10.20944/prepr...
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      https://doi.org/10.20944/prepr...
      Preprint . 2020
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    Authors: Vicente-Serrano; S.M.1; Domínguez-Castro; F.2; +40 Authors

    We analysed long‐term variability and trends in meteorological droughts across Western Europe using the Standardized Precipitation Index (SPI). Precipitation data from 199 stations spanning the period 1851–2018 were employed, following homogenisation, to derive SPI‐3 and SPI‐12 series for each station, together with indices on drought duration and severity. Results reveal a general absence of statistically significant long‐term trends in the study domain, with the exception of significant trends at some stations, generally covering short periods. The largest decreasing trends in SPI‐3 (i.e., increasing drought conditions) were found for summer in the British and Irish Isles. In general, drought episodes experienced in the last two or three decades have precedents during the last 170·years, emphasizing the importance of long records for assessing change. The main characteristic of drought variability in Western Europe is its strong spatial diversity, with regions exhibiting a homogeneous temporal evolution. Notably, the temporal variability of drought in Western Europe is more dominant than long‐term trends. This suggests that long‐term drought trends cannot be confirmed in Western Europe using precipitation records alone. This study provides a long‐term regional assessment of drought variability in Western Europe, which can contribute to better understanding of regional climate change during the past two centuries. This work was supported by the research projects PCIN‐2015‐220 and CGL2017‐82216‐R financed by the Spanish Commission of Science and Technology and FEDER, IMDROFLOOD financed by the WaterWorks 2014 co‐funded call of the European Commission, CROSSDRO financed by the AXIS (Assessment of Cross[X] ‐ sectorial climate Impacts and pathways for Sustainable transformation) JPI‐Climate co‐funded call of the European Commission, INDECIS, which is part of ERA4CS, an ERA‐NET initiated by JPI Climate, and funded by FORMAS (SE), DLR (DE), BMWFW (AT), IFD (DK), MINECO (ES), ANR (FR), FCT (PT) with co‐funding by the European Union (Grant 690462), Irish Research Council COALESCE grant (COALESCE/2019/43). Dhais Peña‐Angulo received a ‘Juan de la Cierva’ postdoctoral contract (FJCI‐2017‐33652 Spanish Ministry of Economy and Competitiveness, MEC), Marco Turco has received funding from the Spanish Ministry of Science, Innovation and Universities through the project PREDFIRE (RTI2018‐099711‐J‐I00). 28 Pags.- 17 Figs.- 3 Tabls. Peer reviewed

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    International Journal of Climatology
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      International Journal of Climatology
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      Horizon / Pleins textes
      Other literature type . 2020
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      CNR ExploRA
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    Authors: Alanwar, Amr; Said, Hazem; Mehta, Ankur; Althoff, Matthias;

    Distributed state estimation strongly depends on collaborative signal processing, which often requires excessive communication and computation to be executed on resource-constrained sensor nodes. To address this problem, we propose an event-triggered diffusion Kalman filter, which collects measurements and exchanges messages between nodes based on a local signal indicating the estimation error. On this basis, we develop an energy-aware state estimation algorithm that regulates the resource consumption in wireless networks and ensures the effectiveness of every consumed resource. The proposed algorithm does not require the nodes to share its local covariance matrices, and thereby allows considerably reducing the number of transmission messages. To confirm its efficiency, we apply the proposed algorithm to the distributed simultaneous localization and time synchronization problem and evaluate it on a physical testbed of a mobile quadrotor node and stationary custom ultra-wideband wireless devices. The obtained experimental results indicate that the proposed algorithm allows saving 86% of the communication overhead associated with the original diffusion Kalman filter while causing deterioration of performance by 16% only. We make the Matlab code and the real testing data available online1.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ arXiv.org e-Print Ar...arrow_drop_down
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    arXiv.org e-Print Archive
    Other literature type . Preprint . 2017
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    http://arxiv.org/pdf/1711.0049...
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    https://doi.org/10.48550/arxiv...
    Article . 2017
    License: arXiv Non-Exclusive Distribution
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      arXiv.org e-Print Archive
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      http://arxiv.org/pdf/1711.0049...
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      https://doi.org/10.48550/arxiv...
      Article . 2017
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Robert Edwards; Alejandro A. Vega; Holly M. Norman; Maria Ohaeri; +113 Authors

    Microbiomes are vast communities of microorganisms and viruses that populate all natural ecosystems. Viruses have been considered to be the most variable component of microbiomes, as supported by virome surveys and examples of high genomic mosaicism. However, recent evidence suggests that the human gut virome is remarkably stable compared with that of other environments. Here, we investigate the origin, evolution and epidemiology of crAssphage, a widespread human gut virus. Through a global collaboration, we obtained DNA sequences of crAssphage from more than one-third of the world's countries and showed that the phylogeography of crAssphage is locally clustered within countries, cities and individuals. We also found fully colinear crAssphage-like genomes in both Old-World and New-World primates, suggesting that the association of crAssphage with primates may be millions of years old. Finally, by exploiting a large cohort of more than 1,000 individuals, we tested whether crAssphage is associated with bacterial taxonomic groups of the gut microbiome, diverse human health parameters and a wide range of dietary factors. We identified strong correlations with different clades of bacteria that are related to Bacteroidetes and weak associations with several diet categories, but no significant association with health or disease. We conclude that crAssphage is a benign cosmopolitan virus that may have coevolved with the human lineage and is an integral part of the normal human gut virome. ispartof: NATURE MICROBIOLOGY vol:4 issue:10 pages:1727-1736 ispartof: location:England status: published

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    Europe PubMed Central
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    Lirias
    Article . 2019
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    Nature Microbiology
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    Radboud Repository
    Article . 2019
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    Hal-Diderot
    Article . 2019
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    Authors: Sergio M. Vicente-Serrano; Cesar Azorin-Molina; Marina Peña-Gallardo; Miquel Tomas-Burguera; +6 Authors

    Drought is a major driver of vegetation activity in Spain, with significant impacts on crop yield, forest growth, and the occurrence of forest fires. Nonetheless, the sensitivity of vegetation to drought conditions differs largely amongst vegetation types and climates. We used a high-resolution (1.1 km) spatial dataset of the normalized difference vegetation index (NDVI) for the whole of Spain spanning the period from 1981 to 2015, combined with a dataset of the standardized precipitation evapotranspiration index (SPEI) to assess the sensitivity of vegetation types to drought across Spain. Specifically, this study explores the drought timescales at which vegetation activity shows its highest response to drought severity at different moments of the year. Results demonstrate that – over large areas of Spain – vegetation activity is controlled largely by the interannual variability of drought. More than 90 % of the land areas exhibited statistically significant positive correlations between the NDVI and the SPEI during dry summers (JJA). Nevertheless, there are some considerable spatio-temporal variations, which can be linked to differences in land cover and aridity conditions. In comparison to other climatic regions across Spain, results indicate that vegetation types located in arid regions showed the strongest response to drought. Importantly, this study stresses that the timescale at which drought is assessed is a dominant factor in understanding the different responses of vegetation activity to drought. This research has been supported by the Spanish Commission of Science and Technology and FEDER (grant no. PCIN-2015-220), the Spanish Commission of Science and Technology and FEDER (grant no. CGL2014-52135-C03-01), the Spanish Commission of Science and Technology and FEDER (grant no. CGL2017-83866-C3-3-R), the Spanish Commission of Science and Technology and FEDER (grant no. CGL2017-82216-R), WaterWorks 2014 (grant no. 690462, IMDROFLOOD), the JPI Climate (grant no. 690462, INDECIS), and WaterWorks 2015 (FORWARD grant). 59 Pags.- 12 Tabls.- 35 Figs. © Author(s) 2019. This work is distributed under the Creative Commons Attribution 4.0 License. Peer reviewed

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    https://doi.org/10.5194/nhess-...
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    Natural Hazards and Earth System Sciences
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    Natural Hazards and Earth System Sciences
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      https://doi.org/10.5194/nhess-...
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      Natural Hazards and Earth System Sciences
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    Authors: Fernando Domínguez-Castro; Sergio M. Vicente-Serrano; Miquel Tomas-Burguera; Marina Peña-Gallardo; +4 Authors

    Assessing the probability of occurrence of drought is important for improving current drought assessment, management and mitigation measures, and strategies across Spain. This study employed two well-established drought indices, the Standardized Precipitation Index (SPI) and the Standardized Precipitation Evapotranspiration Index (SPEI), to characterize drought duration and magnitude at different timescales over Spain. In order to map the drought hazard probability, we applied the extreme value theory and tested different thresholds to generate peak-over-threshold (POT) drought duration and magnitude series. Our results demonstrate that the generalized Pareto (GP) distribution performs well in estimating the frequencies of drought magnitude and duration. Specifically, we found a good agreement between the observed and modelled data when using upper percentiles to generate the POT series. Spatially, our estimations suggest a higher probability of extreme drought events in southern and central Spain compared to the northern and eastern regions. Also, our study found spatial differences in drought probability estimations as a function of the selected drought index (i.e. SPI vs. SPEI) and timescale (i.e. 1, 3, 6, and 12 months). Drought hazard probability maps can contribute to the better management of different sectors (e.g. agriculture, water resources management, urban water supply, and tourism) at national, regional, and even local scale in Spain. This work was supported by the following research projects: CGL2014-52135-C03-01 and PCIN-2015-220 financed by the Spanish Commission of Science and Technology and FEDER, 1560/2015; Herramientas de monitorización de la vegetación mediante modelización ecohidrológica en parques continentales financed by the Red de Parques Nacionales; IM-DROFLOOD financed by Water Works 2014; a co-funded call of the European Commission and INDECIS, which is part of ERA4CS; and an ERA-NET initiated by JPI Climate, funded by MINECO with co-funding by the European Union (grant 690462). Marina Peña-Gallardo was funded by the Spanish Ministry of Economy and Competitiveness, Miquel Tomas-Burguera was supported by a doctoral grant by the Spanish Ministry of Education, Culture and Sport, and Ahmed El Kenawy was supported by a postdoctoral Juan de la Cierva contract. 2 .pdf files: 1) Article (18 Pags.- 2 Tabls.- 10 Figs.); 2) Supplement (20 Pags.- 19 Figs.). © Author(s) 2019. This work is distributed under the Creative Commons Attribution 4.0 License (http://creativecommons.org/licenses/by/4.0/). Peer reviewed

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    Natural Hazards and Earth System Sciences
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    https://doi.org/10.5194/nhess-...
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    Natural Hazards and Earth System Sciences
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      Natural Hazards and Earth System Sciences
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    Authors: Sergio M. Vicente-Serrano; Raquel Nieto; Luis Gimeno; Cesar Azorin-Molina; +5 Authors

    We analyzed changes in surface relative humidity (RH) at the global scale from 1979 to 2014 using both observations and the ERA-Interim dataset. We compared the variability and trends in RH with those of land evapotranspiration and ocean evaporation in moisture source areas across a range of selected regions worldwide. The sources of moisture for each particular region were identified by integrating different observational data and model outputs into a Lagrangian approach. The aim was to account for the possible role of changes in air temperature over land, in comparison to sea surface temperature (SST), but also the role of land evapotranspiration and the ocean evaporation on RH variability. The results demonstrate that the patterns of the observed trends in RH at the global scale cannot be linked to a particular individual physical mechanism. Our results also stress that the different hypotheses that may explain the decrease in RH under a global warming scenario could act together to explain recent RH trends. Albeit with uncertainty in establishing a direct causality between RH trends and the different empirical moisture sources, we found that the observed decrease in RH in some regions can be linked to lower water supply from land evapotranspiration. In contrast, the empirical relationships also suggest that RH trends in other target regions are mainly explained by the dynamic and thermodynamic mechanisms related to the moisture supply from the oceanic source regions. Overall, while this work gives insights into the connections between RH trends and oceanic and continental processes at the global scale, further investigation is still desired to assess the contribution of both dynamic and thermodynamic factors to the evolution of RH over continental regions. Ministerio de Economía y Competitividad | Ref. CGL2014-52135-C03-01 Ministerio de Economía y Competitividad | Ref. CGL2014-60849-JIN Ministerio de Economía y Competitividad | Ref. PCIN-2015-220 European Commission | Ref. n. 690462

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    Earth System Dynamics
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    https://doi.org/10.5194/esd-20...
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    Earth System Dynamics (ESD)
    Other literature type . 2018
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    Earth System Dynamics
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      Earth System Dynamics
      Article . 2018 . Peer-reviewed
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      DOAJ
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      https://doi.org/10.5194/esd-20...
      Preprint . 2017
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      Earth System Dynamics (ESD)
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Amr Alanwar; Jagat Jyoti Rath; Hazem Said; Karl Henrik Johansson; +1 Authors

    We propose two distributed set-based observers using strip-based and set-propagation approaches for linear discrete-time dynamical systems with bounded modeling and measurement uncertainties. Both algorithms utilize a set-based diffusion step, which decreases the estimation errors and the size of estimated sets, and can be seen as a lightweight approach to achieve partial consensus between the distributed estimated sets. Every node shares its measurement with its neighbor in the measurement update step. In the diffusion step, the neighbors intersect their estimated sets using our novel lightweight zonotope intersection technique. A localization example demonstrates the applicability of our algorithms. Comment: Accepted at Journal of the Franklin Institute

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    MediaTUM
    Article . 2022
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    arXiv.org e-Print Archive
    Other literature type . Preprint . 2020
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    Journal of the Franklin Institute
    Article . 2023 . Peer-reviewed
    License: CC BY
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    https://doi.org/10.48550/arxiv...
    Article . 2020
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      arXiv.org e-Print Archive
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      Journal of the Franklin Institute
      Article . 2023 . Peer-reviewed
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    Authors: Amr Alanwar; Victor Gaßmann; Xingkang He; Hazem Said; +3 Authors

    The set-based estimation has gained a lot of attention due to its ability to guarantee state enclosures for safety-critical systems. However, collecting measurements from distributed sensors often requires outsourcing the set-based operations to an aggregator node, raising many privacy concerns. To address this problem, we present set-based estimation protocols using partially homomorphic encryption that preserve the privacy of the measurements and sets bounding the estimates. We consider a linear discrete-time dynamical system with bounded modeling and measurement uncertainties. Sets are represented by zonotopes and constrained zonotopes as they can compactly represent high-dimensional sets and are closed under linear maps and Minkowski addition. By selectively encrypting parameters of the set representations, we establish the notion of encrypted sets and intersect sets in the encrypted domain, which enables guaranteed state estimation while ensuring privacy. In particular, we show that our protocols achieve computational privacy using the cryptographic notion of computational indistinguishability. We demonstrate the efficiency of our approach by localizing a real mobile quadcopter using ultra-wideband wireless devices. Comment: This paper is accepted at the European Journal of Control

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    ZENODO; European Journal of Control
    Article . 2023 . Peer-reviewed
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    arXiv.org e-Print Archive
    Other literature type . Preprint . 2020
    https://doi.org/10.48550/arxiv...
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      ZENODO; European Journal of Control
      Article . 2023 . Peer-reviewed
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      arXiv.org e-Print Archive
      Other literature type . Preprint . 2020
      https://doi.org/10.48550/arxiv...
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    Authors: Peña-Angulo, null; Vicente-Serrano, null; Domínguez-Castro, null; Lorenzo-Lacruz, null; +16 Authors

    This study presents a new data set of gauged streamflow (N = 3,224) for Europe spanning the period 1962-2017. The Monthly Streamflow of Europe Dataset (MSED) is freely available at http://msed.csic.es/. Based on this data set, changes in the characteristics of hydrological drought (i.e., frequency, duration, and severity) were assessed for different regions of Europe. Due to the density of the database, it is possible to delimit spatial patterns in hydrological droughts trend with the greatest detail available to date. Results reveal bidirectional changes in monthly streamflow, with negative changes predominating over central and southern Europe, while positive trends dominate over northern Europe. Temporally, two dominant patterns were noted. The first pattern corresponds to a consistent downward trend in all months, evident for southern Europe. A second pattern was noted over central and northern Europe and western France, with a predominant negative trend during warm months and a positive trend in cold months. For hydrological drought events, results suggest a positive trend toward more frequent and severe droughts in southern and central Europe and conversely a negative trend over northern Europe. This study emphasizes that hydrological droughts show complex spatial patterns across Europe over the past six decades, implying that hydrological drought behavior in Europe has a regional character. Accordingly it is challenging to adopt "efficient" strategies and policies to monitor and mitigate drought impacts at the continental level. International audience

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    Water Resources Research
    Article . 2022 . Peer-reviewed
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    Authors: J. Peter W. Young; Sara Moeskjær; Alexey M. Afonin; Praveen Rahi; +22 Authors

    Bacteria currently included in Rhizobium leguminosarum are too diverse to be considered a single species, so we can refer to this as a species complex (the Rlc). We have found 429 publicly available genome sequences that fall within the Rlc and these show that the Rlc is a distinct entity, well separated from other species in the genus. Its sister taxon is R. anhuiense. We constructed a phylogeny based on concatenated sequences of 120 universal (core) genes, and calculated pairwise average nucleotide identity (ANI) between all genomes. From these analyses, we concluded that the Rlc includes 18 distinct genospecies, plus 7 unique strains that are not placed in these genospecies. Each genospecies is separated by a distinct gap in ANI values, usually at approximately 96% ANI, implying that it is a &lsquo and R. leguminosarum itself. The 16S ribosomal RNA sequence is remarkably diverse within the Rlc, but does not distinguish the genospecies. Partial sequences of housekeeping genes, which have frequently been used to characterize isolate collections, can mostly be assigned unambiguously to a genospecies, but alleles within a genospecies do not always form a clade, so single genes are not a reliable guide to the true phylogeny of the strains. We conclude that access to a large number of genome sequences is a powerful tool for characterizing the diversity of bacteria, and that taxonomic conclusions should be based on all available genome sequences, not just those of type strains. unit. Five of the genospecies include the type strains of named species: R. laguerreae, R. sophorae, R. ruizarguesonis, &ldquo R. indicum&rdquo natural&rsquo

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    Genes
    Other literature type . Article . 2021 . Peer-reviewed
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    DOAJ
    Article . 2021
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    Horizon / Pleins textes
    Other literature type . 2021
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    https://doi.org/10.20944/prepr...
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      Other literature type . Article . 2021 . Peer-reviewed
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      https://doi.org/10.20944/prepr...
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      Article . 2021
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    Authors: Vicente-Serrano; S.M.1; Domínguez-Castro; F.2; +40 Authors

    We analysed long‐term variability and trends in meteorological droughts across Western Europe using the Standardized Precipitation Index (SPI). Precipitation data from 199 stations spanning the period 1851–2018 were employed, following homogenisation, to derive SPI‐3 and SPI‐12 series for each station, together with indices on drought duration and severity. Results reveal a general absence of statistically significant long‐term trends in the study domain, with the exception of significant trends at some stations, generally covering short periods. The largest decreasing trends in SPI‐3 (i.e., increasing drought conditions) were found for summer in the British and Irish Isles. In general, drought episodes experienced in the last two or three decades have precedents during the last 170·years, emphasizing the importance of long records for assessing change. The main characteristic of drought variability in Western Europe is its strong spatial diversity, with regions exhibiting a homogeneous temporal evolution. Notably, the temporal variability of drought in Western Europe is more dominant than long‐term trends. This suggests that long‐term drought trends cannot be confirmed in Western Europe using precipitation records alone. This study provides a long‐term regional assessment of drought variability in Western Europe, which can contribute to better understanding of regional climate change during the past two centuries. This work was supported by the research projects PCIN‐2015‐220 and CGL2017‐82216‐R financed by the Spanish Commission of Science and Technology and FEDER, IMDROFLOOD financed by the WaterWorks 2014 co‐funded call of the European Commission, CROSSDRO financed by the AXIS (Assessment of Cross[X] ‐ sectorial climate Impacts and pathways for Sustainable transformation) JPI‐Climate co‐funded call of the European Commission, INDECIS, which is part of ERA4CS, an ERA‐NET initiated by JPI Climate, and funded by FORMAS (SE), DLR (DE), BMWFW (AT), IFD (DK), MINECO (ES), ANR (FR), FCT (PT) with co‐funding by the European Union (Grant 690462), Irish Research Council COALESCE grant (COALESCE/2019/43). Dhais Peña‐Angulo received a ‘Juan de la Cierva’ postdoctoral contract (FJCI‐2017‐33652 Spanish Ministry of Economy and Competitiveness, MEC), Marco Turco has received funding from the Spanish Ministry of Science, Innovation and Universities through the project PREDFIRE (RTI2018‐099711‐J‐I00). 28 Pags.- 17 Figs.- 3 Tabls. Peer reviewed

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    International Journal of Climatology
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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
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      Horizon / Pleins textes
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    Authors: Alanwar, Amr; Said, Hazem; Mehta, Ankur; Althoff, Matthias;

    Distributed state estimation strongly depends on collaborative signal processing, which often requires excessive communication and computation to be executed on resource-constrained sensor nodes. To address this problem, we propose an event-triggered diffusion Kalman filter, which collects measurements and exchanges messages between nodes based on a local signal indicating the estimation error. On this basis, we develop an energy-aware state estimation algorithm that regulates the resource consumption in wireless networks and ensures the effectiveness of every consumed resource. The proposed algorithm does not require the nodes to share its local covariance matrices, and thereby allows considerably reducing the number of transmission messages. To confirm its efficiency, we apply the proposed algorithm to the distributed simultaneous localization and time synchronization problem and evaluate it on a physical testbed of a mobile quadrotor node and stationary custom ultra-wideband wireless devices. The obtained experimental results indicate that the proposed algorithm allows saving 86% of the communication overhead associated with the original diffusion Kalman filter while causing deterioration of performance by 16% only. We make the Matlab code and the real testing data available online1.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ arXiv.org e-Print Ar...arrow_drop_down
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    arXiv.org e-Print Archive
    Other literature type . Preprint . 2017
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    http://arxiv.org/pdf/1711.0049...
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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    https://doi.org/10.48550/arxiv...
    Article . 2017
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      Other literature type . Preprint . 2017
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      http://arxiv.org/pdf/1711.0049...
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      https://doi.org/10.48550/arxiv...
      Article . 2017
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    Authors: Robert Edwards; Alejandro A. Vega; Holly M. Norman; Maria Ohaeri; +113 Authors

    Microbiomes are vast communities of microorganisms and viruses that populate all natural ecosystems. Viruses have been considered to be the most variable component of microbiomes, as supported by virome surveys and examples of high genomic mosaicism. However, recent evidence suggests that the human gut virome is remarkably stable compared with that of other environments. Here, we investigate the origin, evolution and epidemiology of crAssphage, a widespread human gut virus. Through a global collaboration, we obtained DNA sequences of crAssphage from more than one-third of the world's countries and showed that the phylogeography of crAssphage is locally clustered within countries, cities and individuals. We also found fully colinear crAssphage-like genomes in both Old-World and New-World primates, suggesting that the association of crAssphage with primates may be millions of years old. Finally, by exploiting a large cohort of more than 1,000 individuals, we tested whether crAssphage is associated with bacterial taxonomic groups of the gut microbiome, diverse human health parameters and a wide range of dietary factors. We identified strong correlations with different clades of bacteria that are related to Bacteroidetes and weak associations with several diet categories, but no significant association with health or disease. We conclude that crAssphage is a benign cosmopolitan virus that may have coevolved with the human lineage and is an integral part of the normal human gut virome. ispartof: NATURE MICROBIOLOGY vol:4 issue:10 pages:1727-1736 ispartof: location:England status: published

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    Authors: Sergio M. Vicente-Serrano; Cesar Azorin-Molina; Marina Peña-Gallardo; Miquel Tomas-Burguera; +6 Authors

    Drought is a major driver of vegetation activity in Spain, with significant impacts on crop yield, forest growth, and the occurrence of forest fires. Nonetheless, the sensitivity of vegetation to drought conditions differs largely amongst vegetation types and climates. We used a high-resolution (1.1 km) spatial dataset of the normalized difference vegetation index (NDVI) for the whole of Spain spanning the period from 1981 to 2015, combined with a dataset of the standardized precipitation evapotranspiration index (SPEI) to assess the sensitivity of vegetation types to drought across Spain. Specifically, this study explores the drought timescales at which vegetation activity shows its highest response to drought severity at different moments of the year. Results demonstrate that – over large areas of Spain – vegetation activity is controlled largely by the interannual variability of drought. More than 90 % of the land areas exhibited statistically significant positive correlations between the NDVI and the SPEI during dry summers (JJA). Nevertheless, there are some considerable spatio-temporal variations, which can be linked to differences in land cover and aridity conditions. In comparison to other climatic regions across Spain, results indicate that vegetation types located in arid regions showed the strongest response to drought. Importantly, this study stresses that the timescale at which drought is assessed is a dominant factor in understanding the different responses of vegetation activity to drought. This research has been supported by the Spanish Commission of Science and Technology and FEDER (grant no. PCIN-2015-220), the Spanish Commission of Science and Technology and FEDER (grant no. CGL2014-52135-C03-01), the Spanish Commission of Science and Technology and FEDER (grant no. CGL2017-83866-C3-3-R), the Spanish Commission of Science and Technology and FEDER (grant no. CGL2017-82216-R), WaterWorks 2014 (grant no. 690462, IMDROFLOOD), the JPI Climate (grant no. 690462, INDECIS), and WaterWorks 2015 (FORWARD grant). 59 Pags.- 12 Tabls.- 35 Figs. © Author(s) 2019. This work is distributed under the Creative Commons Attribution 4.0 License. Peer reviewed

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    https://doi.org/10.5194/nhess-...
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    Natural Hazards and Earth System Sciences
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    Natural Hazards and Earth System Sciences
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      https://doi.org/10.5194/nhess-...
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      Natural Hazards and Earth System Sciences
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      Natural Hazards and Earth System Sciences
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    Authors: Fernando Domínguez-Castro; Sergio M. Vicente-Serrano; Miquel Tomas-Burguera; Marina Peña-Gallardo; +4 Authors

    Assessing the probability of occurrence of drought is important for improving current drought assessment, management and mitigation measures, and strategies across Spain. This study employed two well-established drought indices, the Standardized Precipitation Index (SPI) and the Standardized Precipitation Evapotranspiration Index (SPEI), to characterize drought duration and magnitude at different timescales over Spain. In order to map the drought hazard probability, we applied the extreme value theory and tested different thresholds to generate peak-over-threshold (POT) drought duration and magnitude series. Our results demonstrate that the generalized Pareto (GP) distribution performs well in estimating the frequencies of drought magnitude and duration. Specifically, we found a good agreement between the observed and modelled data when using upper percentiles to generate the POT series. Spatially, our estimations suggest a higher probability of extreme drought events in southern and central Spain compared to the northern and eastern regions. Also, our study found spatial differences in drought probability estimations as a function of the selected drought index (i.e. SPI vs. SPEI) and timescale (i.e. 1, 3, 6, and 12 months). Drought hazard probability maps can contribute to the better management of different sectors (e.g. agriculture, water resources management, urban water supply, and tourism) at national, regional, and even local scale in Spain. This work was supported by the following research projects: CGL2014-52135-C03-01 and PCIN-2015-220 financed by the Spanish Commission of Science and Technology and FEDER, 1560/2015; Herramientas de monitorización de la vegetación mediante modelización ecohidrológica en parques continentales financed by the Red de Parques Nacionales; IM-DROFLOOD financed by Water Works 2014; a co-funded call of the European Commission and INDECIS, which is part of ERA4CS; and an ERA-NET initiated by JPI Climate, funded by MINECO with co-funding by the European Union (grant 690462). Marina Peña-Gallardo was funded by the Spanish Ministry of Economy and Competitiveness, Miquel Tomas-Burguera was supported by a doctoral grant by the Spanish Ministry of Education, Culture and Sport, and Ahmed El Kenawy was supported by a postdoctoral Juan de la Cierva contract. 2 .pdf files: 1) Article (18 Pags.- 2 Tabls.- 10 Figs.); 2) Supplement (20 Pags.- 19 Figs.). © Author(s) 2019. This work is distributed under the Creative Commons Attribution 4.0 License (http://creativecommons.org/licenses/by/4.0/). Peer reviewed

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    Natural Hazards and Earth System Sciences
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    https://doi.org/10.5194/nhess-...
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    Natural Hazards and Earth System Sciences
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      Copernicus Publications
      Other literature type . 2019
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    Authors: Sergio M. Vicente-Serrano; Raquel Nieto; Luis Gimeno; Cesar Azorin-Molina; +5 Authors

    We analyzed changes in surface relative humidity (RH) at the global scale from 1979 to 2014 using both observations and the ERA-Interim dataset. We compared the variability and trends in RH with those of land evapotranspiration and ocean evaporation in moisture source areas across a range of selected regions worldwide. The sources of moisture for each particular region were identified by integrating different observational data and model outputs into a Lagrangian approach. The aim was to account for the possible role of changes in air temperature over land, in comparison to sea surface temperature (SST), but also the role of land evapotranspiration and the ocean evaporation on RH variability. The results demonstrate that the patterns of the observed trends in RH at the global scale cannot be linked to a particular individual physical mechanism. Our results also stress that the different hypotheses that may explain the decrease in RH under a global warming scenario could act together to explain recent RH trends. Albeit with uncertainty in establishing a direct causality between RH trends and the different empirical moisture sources, we found that the observed decrease in RH in some regions can be linked to lower water supply from land evapotranspiration. In contrast, the empirical relationships also suggest that RH trends in other target regions are mainly explained by the dynamic and thermodynamic mechanisms related to the moisture supply from the oceanic source regions. Overall, while this work gives insights into the connections between RH trends and oceanic and continental processes at the global scale, further investigation is still desired to assess the contribution of both dynamic and thermodynamic factors to the evolution of RH over continental regions. Ministerio de Economía y Competitividad | Ref. CGL2014-52135-C03-01 Ministerio de Economía y Competitividad | Ref. CGL2014-60849-JIN Ministerio de Economía y Competitividad | Ref. PCIN-2015-220 European Commission | Ref. n. 690462

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    Earth System Dynamics
    Article . 2018 . Peer-reviewed
    License: CC BY
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    DOAJ
    Article . 2018
    Data sources: DOAJ
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    https://doi.org/10.5194/esd-20...
    Preprint . 2017
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    Earth System Dynamics (ESD)
    Other literature type . 2018
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    Earth System Dynamics
    Article . Preprint
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      Earth System Dynamics
      Article . 2018 . Peer-reviewed
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      DOAJ
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      https://doi.org/10.5194/esd-20...
      Preprint . 2017
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      Earth System Dynamics (ESD)
      Other literature type . 2018
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      Earth System Dynamics
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