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  • Mémoires en Sciences de l'Information et de la Communication

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: H. Goelzer; H. Goelzer; H. Goelzer; S. Nowicki; +49 Authors

    Abstract. The Greenland ice sheet is one of the largest contributors to global meansea-level rise today and is expected to continue to lose mass as the Arcticcontinues to warm. The two predominant mass loss mechanisms are increasedsurface meltwater run-off and mass loss associated with the retreat ofmarine-terminating outlet glaciers. In this paper we use a large ensemble ofGreenland ice sheet models forced by output from a representative subset ofthe Coupled Model Intercomparison Project (CMIP5) global climate models to project ice sheet changes and sea-level risecontributions over the 21st century. The simulations are part of theIce Sheet Model Intercomparison Project for CMIP6 (ISMIP6). We estimate thesea-level contribution together with uncertainties due to future climateforcing, ice sheet model formulations and ocean forcing for the twogreenhouse gas concentration scenarios RCP8.5 and RCP2.6. The resultsindicate that the Greenland ice sheet will continue to lose mass in bothscenarios until 2100, with contributions of 90±50 and 32±17 mm to sea-level rise for RCP8.5 and RCP2.6, respectively. The largestmass loss is expected from the south-west of Greenland, which is governed bysurface mass balance changes, continuing what is already observed today.Because the contributions are calculated against an unforced controlexperiment, these numbers do not include any committed mass loss, i.e. massloss that would occur over the coming century if the climate forcingremained constant. Under RCP8.5 forcing, ice sheet model uncertaintyexplains an ensemble spread of 40 mm, while climate model uncertainty andocean forcing uncertainty account for a spread of 36 and 19 mm,respectively. Apart from those formally derived uncertainty ranges, thelargest gap in our knowledge is about the physical understanding andimplementation of the calving process, i.e. the interaction of the ice sheetwith the ocean. info:eu-repo/semantics/published

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    CORE (RIOXX-UK Aggregator)
    Article . 2020
    License: CC BY
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    The Cryosphere (TC)
    Other literature type . Article . 2020 . Peer-reviewed
    License: CC BY
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    St Andrews Research Repository
    Article . 2020 . Peer-reviewed
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    The Cryosphere
    Article . 2020
    Data sources: NARCIS
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    DI-fusion
    Article . 2020 . Peer-reviewed
    Data sources: DI-fusion
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    The Cryosphere (TC)
    Article . 2020
    Data sources: JAIRO
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    https://doi.org/10.5194/tc-201...
    Preprint . 2020
    License: CC BY
    Data sources: Crossref
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    https://epic.awi.de/id/eprint/...
    Other literature type
    License: CC BY
    Data sources: UnpayWall
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    The Cryosphere; The Cryosphere (TC)
    Article . Preprint . 2020
    License: CC BY
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    Hal-Diderot
    Article . 2020
    Data sources: Hal-Diderot
    https://doi.org/10.5194/egusph...
    Other literature type . 2020
    Data sources: Crossref
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      The Cryosphere (TC)
      Other literature type . Article . 2020 . Peer-reviewed
      License: CC BY
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      St Andrews Research Repository
      Article . 2020 . Peer-reviewed
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      The Cryosphere
      Article . 2020
      Data sources: NARCIS
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      DI-fusion
      Article . 2020 . Peer-reviewed
      Data sources: DI-fusion
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      The Cryosphere (TC)
      Article . 2020
      Data sources: JAIRO
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      https://doi.org/10.5194/tc-201...
      Preprint . 2020
      License: CC BY
      Data sources: Crossref
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      The Cryosphere; The Cryosphere (TC)
      Article . Preprint . 2020
      License: CC BY
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      Hal-Diderot
      Article . 2020
      Data sources: Hal-Diderot
      https://doi.org/10.5194/egusph...
      Other literature type . 2020
      Data sources: Crossref
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Agier, Lydiane; Basagaña, Xavier; Maitre, Lea; Granum, Berit; +26 Authors

    BACKGROUND: Several single-exposure studies have documented possible effects of environmental factors on lung function, but none has relied on an exposome approach. We aimed to evaluate the association between a broad range of prenatal and postnatal lifestyle and environmental exposures and lung function in children.METHODS: In this analysis, we used data from 1033 mother-child pairs from the European Human Early-Life Exposome (HELIX) cohort (consisting of six existing longitudinal birth cohorts in France, Greece, Lithuania, Norway, Spain, and the UK of children born between 2003 and 2009) for whom a valid spirometry test was recorded for the child. 85 prenatal and 125 postnatal exposures relating to outdoor, indoor, chemical, and lifestyle factors were assessed, and lung function was measured by spirometry in children at age 6-12 years. Two agnostic linear regression methods, a deletion-substitution-addition (DSA) algorithm considering all exposures simultaneously, and an exposome-wide association study (ExWAS) considering exposures independently, were applied to test the association with forced expiratory volume in 1 s percent predicted values (FEV1%). We tested for two-way interaction between exposures and corrected for confounding by co-exposures.FINDINGS: In the 1033 children (median age 8·1 years, IQR 6·5-9·0), mean FEV1% was 98·8% (SD 13·2). In the ExWAS, prenatal perfluorononanoate (p=0·034) and perfluorooctanoate (p=0·030) exposures were associated with lower FEV1%, and inverse distance to nearest road during pregnancy (p=0·030) was associated with higher FEV1%. Nine postnatal exposures were associated with lower FEV1%: copper (p=0·041), ethyl-paraben (p=0·029), five phthalate metabolites (mono-2-ethyl 5-carboxypentyl phthalate [p=0·016], mono-2-ethyl-5-hydroxyhexyl phthalate [p=0·023], mono-2-ethyl-5-oxohexyl phthalate [p=0·0085], mono-4-methyl-7-oxooctyl phthalate [p=0·040], and the sum of di-ethylhexyl phthalate metabolites [p=0·014]), house crowding (p=0·015), and facility density around schools (p=0·027). However, no exposure passed the significance threshold when corrected for multiple testing in ExWAS, and none was selected with the DSA algorithm, including when testing for exposure interactions.INTERPRETATION: Our systematic exposome approach identified several environmental exposures, mainly chemicals, that might be associated with lung function. Reducing exposure to these ubiquitous chemicals could help to prevent the development of chronic respiratory disease.FUNDING: European Community's Seventh Framework Programme (HELIX project).

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    Other literature type . Article . 2019
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    ACU Research Bank
    Article . 2019
    Data sources: ACU Research Bank
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    Repositori Obert UdL
    Article . 2019
    License: CC BY NC ND
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      Other literature type . Article . 2019
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      Repositori Obert UdL
      Article . 2019
      License: CC BY NC ND
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    Authors: Marta Coll; Lynne J. Shannon; Kristin M. Kleisner; M. J. Juan-Jorda; +34 Authors

    IndiSeas (>Indicators for the Seas>) is a collaborative international working group that was established in 2005 to evaluate the status of exploited marine ecosystems using a suite of indicators in a comparative framework. An initial shortlist of seven ecological indicators was selected to quantify the effects of fishing on the broader ecosystem using several criteria (i.e., ecological meaning, sensitivity to fishing, data availability, management objectives and public awareness). The suite comprised: (i) the inverse coefficient of variation of total biomass of surveyed species, (ii) mean fish length in the surveyed community, (iii) mean maximum life span of surveyed fish species, (iv) proportion of predatory fish in the surveyed community, (v) proportion of under and moderately exploited stocks, (vi) total biomass of surveyed species, and (vii) mean trophic level of the landed catch. In line with the Nagoya Strategic Plan of the Convention on Biological Diversity (2011-2020), we extended this suite to emphasize the broader biodiversity and conservation risks in exploited marine ecosystems. We selected a subset of indicators from a list of empirically based candidate biodiversity indicators initially established based on ecological significance to complement the original IndiSeas indicators. The additional selected indicators were: (viii) mean intrinsic vulnerability index of the fish landed catch, (ix) proportion of non-declining exploited species in the surveyed community, (x) catch-based marine trophic index, and (xi) mean trophic level of the surveyed community. Despite the lack of data in some ecosystems, we also selected (xii) mean trophic level of the modelled community, and (xiii) proportion of discards in the fishery as extra indicators. These additional indicators were examined, along with the initial set of IndiSeas ecological indicators, to evaluate whether adding new biodiversity indicators provided useful additional information to refine our understanding of the status evaluation of 29 exploited marine ecosystems. We used state and trend analyses, and we performed correlation, redundancy and multivariate tests. Existing developments in ecosystem-based fisheries management have largely focused on exploited species. Our study, using mostly fisheries independent survey-based indicators, highlights that biodiversity and conservation-based indicators are complementary to ecological indicators of fishing pressure. Thus, they should be used to provide additional information to evaluate the overall impact of fishing on exploited marine ecosystems. © 2015 Elsevier Ltd. All rights reserved We thank the Euroceans IndiSeas Working Group funded by the European Network of Excellence EUR-OCEANS (FP6, Contract N° 511106), the European collaborative project MEECE – Marine Ecosystem Evolution in a Changing Environment (FP7, Contract N° 212085) and IRD (Institute of Research for Development) and IOC/UNESCO. [...] MC was partially funded by the European Commission through the Marie Curie Career Integration Grant Fellowships – PCIG10-GA-2011-303534 – to the BIOWEB project and by the Spanish National Program Ramon y Cajal. LJS was supported through the South African Research Chair Initiative, funded through the South African Department of Science and Technology (DST) and administered by the South African National Research Foundation (NRF). LJS and YS were also funded by the European collaborative project MEECE – Marine Ecosystem Evolution in a Changing Environment – (FP7, Contract N° 212085). KMK was supported by the Northeast Fisheries Science Center and the Nature Conservancy through a grant from the Gordon and Betty Moore Foundation. MJJJ was supported by an EU Marie Curie International Outgoing Fellowship – PIOF-GA-2013-628116. MFB was supported by the Portuguese Oceanic and Atmospheric Institute and the trawl survey data collected under Biological Sampling (PNAB) Program. LJG would like to thank the Joint Research Centre of the European Commission for support. HO was financed by the Estonian Ministry of Education and Research (Grant SF0180005s10). JJH was supported by the Natural Environment Research Council and Department for Environment, Food and Rural Affairs [Grant Number NE/L003279/1, Marine Ecosystems Research Programme]. GIvdM was supported by the Institute of Marine Research, Norway. KT was partially funded by the project PERSEUS (Policy-oriented marine Environmental Research in the Southern EUropean Seas; FP7 Contract N° 287600). MAT was funded by the Spanish Institute of Oceanography (IEO) through a Predoctoral FPI fellowship. KNM was supported by a National Research Council fellowship at the Northwest Fishery Science Center. YJS and MTT were partially supported by the French project EMIBIOS (FRB, Contract No. APP-SCEN-2010-II). Chatham Rise trawl survey data were provided by the Ministry for Primary Industries. CL acknowledges DEVOTES – Development of innovative tools for understanding marine biodiversity and assessing good Environmental Status – EC project (FP7 Grant Agreement 308392) Coll, Marta ... et al.-- 16 pages, 6 figures, 6 tables Peer Reviewed

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    Ecological Indicators
    Article . 2016 . Peer-reviewed
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      Ecological Indicators
      Article . 2016 . Peer-reviewed
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      Hal-Diderot
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    Authors: Ana, Popovic; Tran, Hai; Anatoly, Tchigvintsev; Mahbod, Hajighasemi; +17 Authors

    AbstractMetagenomics has made accessible an enormous reserve of global biochemical diversity. To tap into this vast resource of novel enzymes, we have screened over one million clones from metagenome DNA libraries derived from sixteen different environments for carboxylesterase activity and identified 714 positive hits. We have validated the esterase activity of 80 selected genes, which belong to 17 different protein families including unknown and cyclase-like proteins. Three metagenomic enzymes exhibited lipase activity, and seven proteins showed polyester depolymerization activity against polylactic acid and polycaprolactone. Detailed biochemical characterization of four new enzymes revealed their substrate preference, whereas their catalytic residues were identified using site-directed mutagenesis. The crystal structure of the metal-ion dependent esterase MGS0169 from the amidohydrolase superfamily revealed a novel active site with a bound unknown ligand. Thus, activity-centered metagenomics has revealed diverse enzymes and novel families of microbial carboxylesterases, whose activity could not have been predicted using bioinformatics tools.

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    Scientific Reports
    Other literature type . Article . 2017 . Peer-reviewed
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    Europe PubMed Central
    Article . 2017
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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    CNR ExploRA
    Article . 2017
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      Scientific Reports
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      Europe PubMed Central
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      CNR ExploRA
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    Authors: Rindorf, Anna; Dichmont, Catherine M.; Thorson, James; Charles, Anthony; +19 Authors

    Peer-reviewed. This is a open access article accepted for publication in ICES Journal of Marine Science following peer review. Rindorf, A., Dichmont, C. M., Thorson, J., Charles, A., Clausen, L. W., Degnbol, P., …Reid, D. G. ... Voss, R. (2017). Inclusion of ecological, economic, social, and institutional considerations when setting targets and limits for multispecies fisheries. ICES Journal of Marine Science: Journal Du Conseil. https://doi.org/10.1093/icesjms/fsw226 is available online at: https://academic.oup.com/icesjms/article/74/2/453/2962394 doi:10.1093/icesjms/fsw226 Targets and limits for long-term management are used in fisheries advice to operationalize the way management reflects societal priorities on ecological, economic, social and institutional aspects. This study reflects on the available published literature as well as new research presented at the international ICES/Myfish symposium on targets and limits for long term fisheries management. We examine the inclusion of ecological, economic, social and institutional objectives in fisheries management, with the aim of progressing towards including all four objectives when setting management targets or limits, or both, for multispecies fisheries. The topics covered include ecological, economic, social and governance objectives in fisheries management, consistent approaches to management, uncertainty and variability, and fisheries governance. We end by identifying ten ways to more effectively include multiple objectives in setting targets and limits in ecosystem based fisheries management.

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    ICES Journal of Marine Science; Research@WUR; Aalborg University Research Portal
    Other literature type . Article . 2017 . Peer-reviewed
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      ICES Journal of Marine Science; Research@WUR; Aalborg University Research Portal
      Other literature type . Article . 2017 . Peer-reviewed
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    Authors: Derek P. Tittensor; Amy R. Baco; Jason M. Hall-Spencer; James C. Orr; +1 Authors

    AbstractCold‐water stony corals create habitat for a diverse range of deep‐water species but are thought to be threatened by ocean acidification due to oceanic uptake of anthropogenic CO2. Knowledge of the severity of this threat is hampered by our limited understanding of the distribution and habitat requirements of these corals. Here we estimate the global acidification threat to these organisms using a global database of cold‐water stony coral records and a species distribution modelling approach. We parameterised the models using present‐day environmental data, and then replaced these data with future projections of ocean chemistry from the year 2099. We found suitable coral habitat to be very heterogeneously distributed, being concentrated in the northern North Atlantic and around New Zealand. Projected changes in ocean chemistry induced a pronounced reduction in habitat suitability in the North Atlantic, and a low‐to‐moderate impact elsewhere under both the IPCC IS92a and S650 scenarios. Seamount summits are impacted by these changes, but consistently provide more suitable habitat than the surrounding seafloor, with around 98% of seamount summits having higher suitability in both future scenarios; this is because they lie in shallower waters with a higher aragonite saturation state. These results suggest that anthropogenic‐induced changes in ocean chemistry are likely to severely impact cold‐water stony coral habitat in the deep‐sea of the North Atlantic, and that impacts will be less severe elsewhere. We predict that coral communities on the summits and upper slopes of seamounts will be less susceptible to ocean acidification during this century than those on the surrounding seafloor, and thus that seamounts may serve as temporary refugia.

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    Marine Ecology
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    Marine Ecology
    Other literature type . Article . 2010 . Peer-reviewed
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      Marine Ecology
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    Authors: Borrelli, C; Sabbatini, A.; Luna, G,; Nardelli, M.; +4 Authors

    Benthic foraminifera are an important component of the marine biota, but protocols for investigating their viability and metabolism are still extremely limited. Classical studies on benthic foraminifera have been based on direct counting under light microscopy. Typically, these organisms are stained with Rose Bengal, which binds proteins and other macromolecules, but does not allow discrimination between viable and recently dead organisms. The fluorescent in situ hybridization technique (FISH) represents a new and useful approach to identify living cells possessing an active metabolism. Our work is the first test of the suitability of the FISH technique, based on fluorescent probes targeting the 18S rRNA, to detect live benthic foraminifera. The protocol was applied on <I>Ammonia</I> group and Miliolids, as well as on agglutinated polythalamous (i.e., <I>Leptohalysis scottii</I> and <I>Eggerella scabra</I>) and soft-shelled monothalamous (i.e., <I>Psammophaga</I> sp. and saccamminid morphotypes) taxa. The results from FISH analyses were compared with those obtained, on the same specimens assayed with FISH, from microscopic analysis of the cytoplasm colour, presence of pigments and pseudopodial activity. Our results indicate that FISH targets only metabolically active foraminifera, and allows discerning from low to high cellular activity, validating the hypothesis that the intensity of the fluorescent signal emitted by the probe is dependent upon the physiological status of cells. These findings support the usefulness of this molecular approach as a key tool for obtaining information on the physiology of living foraminifera, both in field and experimental settings.

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    Authors: Sophie Bastin; Philippe Drobinski; Marjolaine Chiriaco; Olivier Bock; +7 Authors

    This work uses a network of GPS stations over Europe from which a homogenized integrated water vapor (IWV) dataset has been retrieved, completed with colocated temperature and precipitation measurements over specific stations to (i) estimate the biases of six regional climate models over Europe in terms of humidity; (ii) understand their origins; and (iii) finally assess the impact of these biases on the frequency of occurrence of precipitation. The evaluated simulations have been performed in the framework of HYMEX/Med-CORDEX programs and cover the Mediterranean area and part of Europe at horizontal resolutions of 50 to 12 km. The analysis shows that models tend to overestimate the low values of IWV and the use of the nudging technique reduces the differences between GPS and simulated IWV. Results suggest that physics of models mostly explain the mean biases, while dynamics affects the variability. The land surface–atmosphere exchanges affect the estimation of IWV over most part of Europe, especially in summer. The limitations of the models to represent these processes explain part of their biases in IWV. However, models correctly simulate the dependance between IWV and temperature, and specifically the deviation that this relationship experiences regarding the Clausius–Clapeyron law after a critical value of temperature (Tbreak). The high spatial variability of Tbreak indicates that it has a strong dependence on local processes which drive the local humidity sources. This explains why the maximum values of IWV are not necessarily observed over warmer areas, which are often dry areas. Finally, it is shown over the SIRTA observatory (near Paris) that the frequency of occurrence of light precipitation is strongly conditioned by the biases in IWV and by the precision of the models to reproduce the distribution of IWV as a function of the temperature. The results of the models indicate that a similar dependence occurs in other areas of Europe, especially where precipitation has a predominantly convective character. According to the observations, for each range of temperature, there is a critical value of IWV from which precipitation starts to increase. The critical values and the probability of exceeding them are simulated with a bias that depends on the model. Those models, which generally present light precipitation too often, show lower critical values and higher probability of exceeding them. This work is a contribution to the HyMeX program (HYdrological cycle in The Mediterranean EXperiment) through INSU-MISTRALS support and the MEDCORDEX program (Coordinated Regional climate Downscaling EXperiment–Mediterranean region). This research has received funding from the French National Research Agency (ANR) project REMEMBER (grant ANR-12-SENV-001) and is a contribution to the VEGA project through LEFE/INSU support, to the EECLAT project through LEFE-INSU and CNES supports and to the GNSS4SWEC COST action ES1206 through EU support. It was supported by the IPSL group for regional climate and environmental studies, with granted access to the HPC resources of GENCI/IDRIS (under allocation i2011010227), by SIRTA Working Group “Climate studies” and by the national infrastructure ACTRIS-FR, identified on the French road map for Research Infrastructures, published by the Ministry of Research. The SIRTA-ReOBS effort also benefited from the support of the L-IPSL funded by ANR under the “Programme d'Investissements d'Avenir” (grant ANR-10-LABX-0018) and by the EUCLIPSE project funded by the European Commission under the Seventh Framework Program (grant no. 244067).

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    Atmospheric Chemistry and Physics (ACP)
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    https://doi.org/10.5194/acp-20...
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      https://doi.org/10.5194/acp-20...
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    Authors: Cyrille Guillon; Carsten Liebig; Sébastien Paul; Anne-Sophie Mamede; +3 Authors

    The ammoxidation of allyl alcohol was demonstrated over antimony–iron oxide catalysts with a Sb/Fe ratio of 0.6 and 1. Both catalysts showed high performance with 83 and 84% yield of acrylonitrile, respectively, whereby the main difference was found in the initial performance. This was ascribed to the in-operando formation of the SbFeO4 mixed oxide on the catalyst surface under reaction conditions, as proven by XPS analysis.

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