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542 Research products

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Simon Schnebert; Maxime Goguet; Emilio J. Vélez; Alexandra Depincé; +3 Authors

    International audience; Autophagy is a pleiotropic and evolutionarily conserved process in eukaryotes that encompasses different types of mechanisms by which cells deliver cytoplasmic constituents to the lysosome for degradation. Interestingly, in mammals, two different and specialized autophagic pathways, (i) the chaperone-mediated autophagy (CMA) and (ii) the endosomal microautophagy (eMI), both rely on the use of the same cytosolic chaperone HSPA8 (also known as HSC70) for targeting specific substrates to the lysosome. However, this is not true for all organisms, and differences exist between species with respect to the coexistence of these two autophagic routes. In this paper, we present an in-depth analysis of the evolutionary history of the main components of CMA and eMI and discuss how the observed discrepancies between species may contribute to improving our knowledge of these two functions and their interplays.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Cellsarrow_drop_down
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    Cells
    Article . 2022 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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    Cells
    Article . 2022
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Cellsarrow_drop_down
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      Cells
      Article . 2022 . Peer-reviewed
      License: CC BY
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Cells
      Article . 2022
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Paul Marchal; Youen Vermard;

    AbstractThis study examined some of the spatial patterns and temporal dynamics of species targeting and discarding, for the French bottom trawlers operating in the eastern English Channel, building on spatial overlaps (or mismatches) between fishing effort, survey-based biomass or abundance indices and discard rates. We first identified that cuttlefish (Sepia officinalis), squids (Loligo sp.) and, to a lesser degree, striped red mullet (Mullus surmuletus), and seabass (Dicentrarchus labrax) were the main targets, while fishing for historically important species was less attractive. This result was broadly in accord with catch compositions, although mackerel (Scomber scombrus) targeting was possibly underestimated. We also showed that the distributions of fishing effort and of undersized herring, plaice, and whiting did not overlap. Although fishing effort covered fishing grounds populated with undersized horse mackerel, the proportion of undersized individuals in the discards was small. Plaice and whiting discard rates overlapped in space with undersized abundance indices. Fishing effort may have avoided spatial units with potentially high plaice discard rates, which may have been driven by large proportions of undersized fish, but also by restricted access to coastal area. Overall, the EU Landing Obligation had limited effects on fishing effort allocation relative to either undersized abundance or discard rates distributions.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ICES Journal of Mari...arrow_drop_down
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    ICES Journal of Marine Science
    Article . 2022 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ICES Journal of Mari...arrow_drop_down
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      ICES Journal of Marine Science
      Article . 2022 . Peer-reviewed
      License: CC BY
      Data sources: Crossref
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Calduch-Giner, Josep; Holhorea, Paul George; Ferrer, Miguel Ángel; Naya-Català, Fernando; +11 Authors

    Behavioral parameters are reliable and useful operational welfare indicators that yield information on fish health and welfare status in aquaculture. However, aquatic environment is still constraining for some solutions based on underwater cameras or echo sounder transmitters. Thus, the use of bio-loggers internally or externally attached to sentinel fish emerges as a solution for fish welfare monitoring in tanks- and sea cages-rearing systems. This review is focused on the recently developed AEFishBIT, a small and light data storage tag designed to be externally attached to fish operculum for individual and simultaneous monitoring of swimming activity and ventilation rates under steady and unsteady swimming conditions for short-term periods. AEFishBIT is a tri-axial accelerometer with a frequency sampling of 50–100 Hz that is able to provide proxy measurements of physical and metabolic activities validated by video recording, exercise tests in swim tunnel respirometers, and differential operculum and body tail movements across fish species with differences in swimming capabilities. Tagging procedures based on tag piercing and surgery procedures are adapted to species anatomical head and operculum features, which allowed trained operators to quickly complete the tagging procedure with a fast post-tagging recovery of just 2.5–7 h in both salmonid (rainbow trout, Atlantic salmon) and non-salmonid (gilthead sea bream, European sea bass) farmed fish. Dual recorded data are processed by on-board algorithms, providing valuable information on adaptive behavior through the productive cycle with the changing environment and genetics. Such biosensing approach also provides valuable information on social behavior in terms of adaptive capacities or changes in daily or seasonal activity, linking respiratory rates with changes in metabolic rates and energy partitioning between growth and physical activity. At short-term, upcoming improvements in device design and accompanying software are envisaged, including energy-harvesting techniques aimed to prolong the battery life and the addition of a gyroscope for the estimation of the spatial distribution of fish movements. Altogether, the measured features of AEFishBIT will assist researchers, fish farmers and breeders to establish stricter welfare criteria, suitable feeding strategies, and to produce more robust and efficient fish in a changing environment, helping to improve fish management and aquaculture profitability. 1,558 4,912 10,3 SCIE Q1

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Frontiers in Marine ...arrow_drop_down
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    Frontiers in Marine Science
    Other literature type . Article . 2022 . Peer-reviewed
    License: CC BY
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    Frontiers in Marine Science
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Frontiers in Marine ...arrow_drop_down
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      Frontiers in Marine Science
      Other literature type . Article . 2022 . Peer-reviewed
      License: CC BY
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      Frontiers in Marine Science
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    Authors: Zander, Katrin; Daurès, Fabienne; Feucht, Yvonne; Malvarosa, Loretta; +2 Authors

    Abstract The term ‘coastal fisheries’ designates a form of fishing which is under heavy pressure due to competition by large-scale high sea fishing. Setting up markets for seafood from coastal fisheries might offer possibilities of product differentiation when appreciated by consumers. The aim of this research is to analyse the potential of marketing seafood from coastal fisheries by investigating consumers’ perception of coastal fisheries and their attitudes towards a label for coastal fishery products in France and Italy. This research combined qualitative (focus groups) and quantitative methods (online survey) in two different steps. ‘Coastal fisheries’ were mainly perceived positively, as they provide fresh products, and are healthy and important for coastal areas. Although opinions on labelling in general, and on coastal fisheries specifically, varied widely, about 70% of the respondents were in favour of a coastal fisheries label. The willingness to use a coastal fisheries label increased significantly when domestic origin, high-quality products, eco-friendliness, support of local/coastal communities and artisanal fishing practices were part of this kind of label. It is concluded that using a label for communicating the origin coastal fisheries appears to be promising for the two study countries: France and Italy. A prerequisite for the success of this kind of approach is that the seafood products must fully comply with consumer expectations, as they are of domestic origin, be of very high product quality and fished in an artisanal or eco-friendly manner.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ArchiMer - Instituti...arrow_drop_down
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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Fisheries Research
    Article . 2022 . Peer-reviewed
    License: Elsevier TDM
    Data sources: Sygma; Crossref
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ArchiMer - Instituti...arrow_drop_down
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Fisheries Research
      Article . 2022 . Peer-reviewed
      License: Elsevier TDM
      Data sources: Sygma; Crossref
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Souza, A, T; Argillier, Christine; Blabolil, P.; Ded, V.; +9 Authors

    Climate is a major driver of species distribution and biological invasions worldwide. In this study, we combined the catches of a widespread and invasive species, the common carp (Cyprinus carpio), with climate data to assess the importance of climate variables on the ability of the species to maintain self-sustaining populations in European lakes. Data were collected on common carp populations in 378 lakes in six European countries over a 16-year period (551 sampling campaigns). All catches followed the same standardized sampling procedure (European CEN gillnets). Climate data consisted of daily averages of air temperature and precipitation. Population self-sustainability was determined by the relative catches of different size classes and the presence of juveniles. The climate data were used to train a classification tree model to characterize the effects of climate on common carp population viability. Results indicated that climate is an important predictor of common carp population viability, which is particularly enhanced under dry conditions and elevated temperatures during spring and summer months. Areas of high population viability strongly overlapped with the invasive range of the species. According to Intergovernmental Panel on Climate Change (IPCC) climate projections, some areas where common carp currently have a low probability of maintaining viable populations will shift toward climatic conditions that enhance their viability and invasion potential.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Biological Invasionsarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Biological Invasions
    Article . 2022 . Peer-reviewed
    License: Springer TDM
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    CNR ExploRA
    Article . 2022
    Data sources: CNR ExploRA
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Biological Invasionsarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Biological Invasions
      Article . 2022 . Peer-reviewed
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      CNR ExploRA
      Article . 2022
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    Authors: Paolo Prosperi; James Kirwan; Damian Maye; Emi Tsakalou; +4 Authors

    AbstractEuropean small‐scale fisheries are confronted with several challenges, notably a decrease in the number of people engaged in capture fishing, growing competition from less expensive extra‐European Union markets, rising operational costs, strict regulations and the depletion of fishing stocks. Many small‐scale fishers must adapt to change to maintain or increase their income using different business strategies. In this respect, we argue that new and diversified institutional arrangements combined with building social capital can help reach long‐term economic sustainability for small‐scale fisheries businesses, as well as the social‐ecological resilience of coastal areas. In order to understand and analyse the multiplicity of strategies applied by small‐scale fishers–including expansion towards non–productivist activities, this article examines the role of new institutional arrangements based on small‐scale, traditional, quality‐orientated, multifunctional business strategies and non‐fishing activities. Using a case‐study approach, we analyse–in three different European fishery contexts (Greece, Italy and the UK)–how the interplay between building adaptive arrangements and the creation of social capital in selected small‐scale fisheries provides relevant prerequisites for resilience.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ CORE (RIOXX-UK Aggre...arrow_drop_down
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    CORE (RIOXX-UK Aggregator)
    Article . 2022
    License: rioxx All Rights Reserved
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    Sociologia Ruralis
    Article . 2022 . Peer-reviewed
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ CORE (RIOXX-UK Aggre...arrow_drop_down
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      Article . 2022
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      Sociologia Ruralis
      Article . 2022 . Peer-reviewed
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Ferreira Araujo, Beatriz; Osterwalder, Stefan; id_orcid0000-0001-8775-0813; Szponar, Natalie; Lee, Domenica; +19 Authors

    Nature Communications, 13 ISSN:2041-1723

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    Research Collection
    Article . 2022
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      Research Collection
      Article . 2022
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Chênais, Nathalie; Nóbrega, Rafael; Thomas, Manon; Porcon, Béatrice; +6 Authors

    National audience; Les mécanismes impliqués dans le renouvèlement des cellules germinales souches chez les mâles immatures ou chez les individus adultes sexuellement matures restent très mal connus, en particulier chez les poissons. La production d'organoïdes testiculaires est une approche de choix pour étudier les interactions moléculaires entre les cellules somatiques et les cellules germinales ainsi que les modes de divisions symétriques et/ou asymétriques des cellules souches germinales. En effet, au contraire des cultures 2D, les organoïdes pourraient permettre de reproduire une niche germinale plus proche de celle rencontrée in vivo.

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    Authors: Girard, Sophie;

    Abstract This paper investigates the potential of Geographical Indications to enhance the environmental sustainability of bivalve aquaculture, with a focus on the Protected Designation of Origin (PDO) granted to the bouchot mussel of the bay of Mont Saint-Michel (BMSM). First, a retrospective analysis of the PDO application process was carried out to provide insight into specific environmental and regulatory issues facing mussel farming in the BMSM (e.g. common resource management). Second, further assessment relied on a comparative analysis with other public labelling strategies developed by mussel farmers, notably emerging organic certification. This involved setting up an ad-hoc analysis grid to evaluate different dimensions of sustainability, namely economic, environmental and governance. The discussion then addresses the potential of PDO to promote sustainable mussel farming with respect to the current trends in food/mussel labelling in the market and to the increasing demand for environmental preservation in marine and coastal areas. It also emphasises the overlap between different EU labelling schemes that questions their consistency and legibility, particularly for bivalve aquaculture. In conclusion, the system of quality linked to origin has provided an appropriate framework for supporting the implementation of sustainable bouchot mussel farming in the BMSM, thanks to the relevance and inclusiveness of the PDO labelling process and institutional support. Next, to strengthen the legitimacy of the PDO to guarantee the environmental sustainability of farming methods and increase protection on the market, more adaptive management of the PDO label is recommended.

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    Marine Policy
    Other literature type . Article . 2021 . 2022 . Peer-reviewed
    License: Elsevier TDM
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      Marine Policy
      Other literature type . Article . 2021 . 2022 . Peer-reviewed
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    Authors: Besson, Mathieu; Rombout, Nicky; Salou, Germain; Vergnet, Alain; +8 Authors

    Genetic improvement of feed efficiency is key to improve the economic and environmental sustainability of fish farming. However, it requires individual phenotypes of feed efficiency, which are difficult if not impossible to obtain when fish are reared in tanks or cages. Here, we applied and validated on gilthead sea bream a method to evaluate individual feed efficiency based on individual rearing of fish in aquariums under restricted feeding. We collected individual phenotypes of feed efficiency in aquariums on 538 sea bream (average weight = 54.50 g). Based on these individual phenotypes, fish (average weight = 174.6 g) were reared in groups of divergent phenotypes (high or low feed efficiency), validating that individual feed efficiency had an impact on group feed efficiency at a later stage. All 538 fish, their parents as well as 794 sibs reared in cages in a production environment, were genotyped on a 57k SNP array to estimate genomic heritability and correlations between traits. We showed that feed efficiency was heritable but did not find significant associated QTLs. We also showed that feed efficiency was negatively genetically correlated to viscera yield, indicating that the most efficient fish had less viscera than the least efficient ones. Altogether, these results support that measuring individual feed efficiency in aquariums under restricted feeding may be used as a reliable phenotyping method to genetically improve feed efficiency, despite the bias intrinsically linked to individual rearing. 3,216 0,74 10,3 SCIE Q1

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    https://doi.org/10.1016/j.aqre...
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    ZENODO
    Article . 2022
    License: CC BY
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      https://doi.org/10.1016/j.aqre...
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Simon Schnebert; Maxime Goguet; Emilio J. Vélez; Alexandra Depincé; +3 Authors

    International audience; Autophagy is a pleiotropic and evolutionarily conserved process in eukaryotes that encompasses different types of mechanisms by which cells deliver cytoplasmic constituents to the lysosome for degradation. Interestingly, in mammals, two different and specialized autophagic pathways, (i) the chaperone-mediated autophagy (CMA) and (ii) the endosomal microautophagy (eMI), both rely on the use of the same cytosolic chaperone HSPA8 (also known as HSC70) for targeting specific substrates to the lysosome. However, this is not true for all organisms, and differences exist between species with respect to the coexistence of these two autophagic routes. In this paper, we present an in-depth analysis of the evolutionary history of the main components of CMA and eMI and discuss how the observed discrepancies between species may contribute to improving our knowledge of these two functions and their interplays.

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    Cells
    Article . 2022 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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    Cells
    Article . 2022
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      Cells
      Article . 2022 . Peer-reviewed
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      Cells
      Article . 2022
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    Authors: Paul Marchal; Youen Vermard;

    AbstractThis study examined some of the spatial patterns and temporal dynamics of species targeting and discarding, for the French bottom trawlers operating in the eastern English Channel, building on spatial overlaps (or mismatches) between fishing effort, survey-based biomass or abundance indices and discard rates. We first identified that cuttlefish (Sepia officinalis), squids (Loligo sp.) and, to a lesser degree, striped red mullet (Mullus surmuletus), and seabass (Dicentrarchus labrax) were the main targets, while fishing for historically important species was less attractive. This result was broadly in accord with catch compositions, although mackerel (Scomber scombrus) targeting was possibly underestimated. We also showed that the distributions of fishing effort and of undersized herring, plaice, and whiting did not overlap. Although fishing effort covered fishing grounds populated with undersized horse mackerel, the proportion of undersized individuals in the discards was small. Plaice and whiting discard rates overlapped in space with undersized abundance indices. Fishing effort may have avoided spatial units with potentially high plaice discard rates, which may have been driven by large proportions of undersized fish, but also by restricted access to coastal area. Overall, the EU Landing Obligation had limited effects on fishing effort allocation relative to either undersized abundance or discard rates distributions.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ICES Journal of Mari...arrow_drop_down
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    ICES Journal of Marine Science
    Article . 2022 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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