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  • TeloBase is a curated database containing computationally predicted and experimentally confirmed telomere sequences of species across the whole tree of life. It contains information from the literature (1978 – September 2022) and predicted telomere motifs from publicly available NGS data stored in the SRA database (NCBI) and user submitted data. TeloBase is supplemented by internal taxonomy utilizing popular on-line taxonomic resources that enables in-house data filtration and graphical visualisation of telomere DNA evolutionary dynamics in the form of heat tree plots. Its manual and other relevant data (raw results from NGS data analysis and Atlas of telomere sequences) can be accessed on https://www.ceitec.eu/chromatin-molecular-complexes/rg51/tab?tabId=125#TeloBase.

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  • E-cyanobacterium.org is a web-based platform for public sharing, annotation, analysis, and visualisation of dynamical models and wet-lab experiments related to cyanobacteria. It allows models to be represented at different levels of abstraction — as biochemical reaction networks or ordinary differential equations. The platform is unique in providing concise mapping of mathematical models to the formalised consortium-agreed biochemical description. The main goal of the platform is to connect the world of biological knowledge with benefits of mathematical description of dynamic processes.

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  • The Archaeological Map of the Czech Republic (AMCR) is a repository designed for information on archaeological investigations, sites and finds, operated by the Archaeological Institutes of the CAS in Prague and Brno. The archives of these institutions contain documentation of archaeological fieldwork on the territory of the Czech Republic from 1919 to the present day, and they continue to enrich their collections. The AMCR database and related documents form the largest collection of archaeological data concerning the Czech Republic and are therefore an important part of our cultural heritage. The AMCR digital archive contains various types of records - individual archaeological documents (texts, field photographs, aerial photographs, maps and plans, digital data), projects, fieldwork events, archaeological sites, records of individual finds and a library of 3D models. Data and descriptive information are continuously taken from the AMCR and presented in the the AMCR Digital Archive interface.

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  • HCVIVdb is a database of published variations observed within the internal ribosome entry site (IRES) of the hepatitis C Virus.

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  • ValidatorDB is a collection of validation results for the entire Protein Data Bank. Annotation (3-letter code) of HET residues larger than 6 heavy atoms is inspected, i.e. if the residue has the same topology and stereochemistry as the model ligand or residue stored in the wwCCD. Validation reports for the entire database can be inspected as well as for the arbitrary set of PDB entries or PDB annotations (3-letter residue code). Results are available in graphical form via Web UI and can be downloaded in the form of CSV files for further inspection.

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  • This site provides access to the collections and research output of the institution. The interface is in Czech and English and includes RSS feeds.

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  • Charles University’s repository of publishing activities is a place to store and make available the full texts of the results of science and research of authors at Charles University. The repository is operated in the DSpace system. Employees and students of Charles University can store their results in the repository. Storing and making the result available (auto-archiving) in the CU Repository of Publishing Activities is voluntary for CU employees and students. The process of auto-archiving results in the repository is established in Rector's Directive no. 40/2021, Records of creative activity, projects, and employee mobility at Charles University.. Auto-archiving of results in the repository takes place via the OBD IS Věda module (CU CRIS system). The results are then automatically transferred to this repository after being checked by the faculty open access coordinators.

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  • Institutional repository of Mykolas Romeris University manages and preserves the academic works of faculties, graduate students and research groups. The repository offers free and permanent access to collections of University scholarly materials in digital content. The interface is in English and includes RSS feeds to alert users to new content.

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405 Data sources
  • TeloBase is a curated database containing computationally predicted and experimentally confirmed telomere sequences of species across the whole tree of life. It contains information from the literature (1978 – September 2022) and predicted telomere motifs from publicly available NGS data stored in the SRA database (NCBI) and user submitted data. TeloBase is supplemented by internal taxonomy utilizing popular on-line taxonomic resources that enables in-house data filtration and graphical visualisation of telomere DNA evolutionary dynamics in the form of heat tree plots. Its manual and other relevant data (raw results from NGS data analysis and Atlas of telomere sequences) can be accessed on https://www.ceitec.eu/chromatin-molecular-complexes/rg51/tab?tabId=125#TeloBase.

    more_vert
  • E-cyanobacterium.org is a web-based platform for public sharing, annotation, analysis, and visualisation of dynamical models and wet-lab experiments related to cyanobacteria. It allows models to be represented at different levels of abstraction — as biochemical reaction networks or ordinary differential equations. The platform is unique in providing concise mapping of mathematical models to the formalised consortium-agreed biochemical description. The main goal of the platform is to connect the world of biological knowledge with benefits of mathematical description of dynamic processes.

    more_vert
  • The Archaeological Map of the Czech Republic (AMCR) is a repository designed for information on archaeological investigations, sites and finds, operated by the Archaeological Institutes of the CAS in Prague and Brno. The archives of these institutions contain documentation of archaeological fieldwork on the territory of the Czech Republic from 1919 to the present day, and they continue to enrich their collections. The AMCR database and related documents form the largest collection of archaeological data concerning the Czech Republic and are therefore an important part of our cultural heritage. The AMCR digital archive contains various types of records - individual archaeological documents (texts, field photographs, aerial photographs, maps and plans, digital data), projects, fieldwork events, archaeological sites, records of individual finds and a library of 3D models. Data and descriptive information are continuously taken from the AMCR and presented in the the AMCR Digital Archive interface.

    more_vert
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  • HCVIVdb is a database of published variations observed within the internal ribosome entry site (IRES) of the hepatitis C Virus.

    more_vert
  • ValidatorDB is a collection of validation results for the entire Protein Data Bank. Annotation (3-letter code) of HET residues larger than 6 heavy atoms is inspected, i.e. if the residue has the same topology and stereochemistry as the model ligand or residue stored in the wwCCD. Validation reports for the entire database can be inspected as well as for the arbitrary set of PDB entries or PDB annotations (3-letter residue code). Results are available in graphical form via Web UI and can be downloaded in the form of CSV files for further inspection.

    more_vert
  • This site provides access to the collections and research output of the institution. The interface is in Czech and English and includes RSS feeds.

    more_vert
  • Charles University’s repository of publishing activities is a place to store and make available the full texts of the results of science and research of authors at Charles University. The repository is operated in the DSpace system. Employees and students of Charles University can store their results in the repository. Storing and making the result available (auto-archiving) in the CU Repository of Publishing Activities is voluntary for CU employees and students. The process of auto-archiving results in the repository is established in Rector's Directive no. 40/2021, Records of creative activity, projects, and employee mobility at Charles University.. Auto-archiving of results in the repository takes place via the OBD IS Věda module (CU CRIS system). The results are then automatically transferred to this repository after being checked by the faculty open access coordinators.

    more_vert
  • Institutional repository of Mykolas Romeris University manages and preserves the academic works of faculties, graduate students and research groups. The repository offers free and permanent access to collections of University scholarly materials in digital content. The interface is in English and includes RSS feeds to alert users to new content.

    more_vert
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