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- Data Repository United States, Netherlands Compatibility:collected from a compatible aggregatorPartners:CMU, NSF, CLARIN, NIDCD Humanities and Social Sciences, Linguistics, HumanitiesCMU,NSF,CLARIN,NIDCD
re3data: r3d100010887
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequenceMing Chen's Lab, Zhejiang University, Hangzhou, China
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:LPL Phylogeny, Metagenomics, GenomicsLPL
Ocean Gene Atlas(OGA) is a webservice to explore the biogeography of marine genes based on sequence similarity with environmental genomics datasets. OGA is currently implemented with the Tara Ocean Microbiome-Reference Gene Catalog database and the Marine Atlas of Tara Ocean Unigenes. Gene abundance estimates are computed for DNA metagenomes from the smallest Tara Oceans size fractions (from 0 to 3 µm, OM-RGC), and for RNA metatranscriptomes from Tara Oceans larger size fractions (0.8 to 2000µm, MATOU). OGA also includes curated Tara Oceans Eukaryotic Metagenome and Single-Cell Assembled Genomes (MAGs and SAGs), metagenomics-based transcriptomes (MGTs) and metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean (Arctic MAG+G).
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:collected from a compatible aggregatorPartners:Netherlands Institute for Sound and Vision Humanities and Social Sciences, Fine Arts, Music, Theatre and Media Studies, Theatre and Media StudiesNetherlands Institute for Sound and Vision
re3data: r3d100012167
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:Not yet registeredPartners:KB Humanities and Social Sciences, History, LinguisticsKB
re3data: r3d100013609
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For further information contact us at helpdesk@openaire.eu - Data Repository Colombia, United States, France Compatibility:Not yet registeredPartners:Alliance of Bioversity and CIAT, CIAT , Harvard Dataverse, CGIAR Life Sciences, Plant Sciences, Agriculture, Forestry, Horticulture and Veterinary MedicineAlliance of Bioversity and CIAT,CIAT ,Harvard Dataverse,CGIAR
re3data: r3d100011880
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For further information contact us at helpdesk@openaire.eu - Data Repository Germany, European Union Compatibility:Not yet registeredPartners:DARIAH-DE, Humanities Data Center Partner, Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek, BMBF, DARIAH-EU Humanities and Social Sciences, Fine Arts, Music, Theatre and Media Studies, HumanitiesDARIAH-DE,Humanities Data Center Partner,Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek,BMBF,DARIAH-EU
The DARIAH-DE repository is a digital long-term archive for human and cultural-scientific research data. Each object described and stored in the DARIAH-DE Repository has a unique and lasting Persistent Identifier (DOI), with which it is permanently referenced, cited, and kept available for the long term. In addition, the DARIAH-DE Repository enables the sustainable and secure archiving of data collections. The DARIAH-DE Repository is not only to DARIAH-DE associated research projects, but also to individual researchers as well as research projects that want to save their research data persistently, referenceable and long-term archived and make it available to third parties. The main focus is the simple and user-oriented access to long-term storage of research data. To ensure its long term sustainability, the DARIAH-DE Repository is operated by the Humanities Data Centre.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:ICBMS Biology, Protein interactions, carbohydrateICBMS
re3data: r3d100010672
MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations. MatrixDB reports interactions with individual polypeptide chains or with multimers (e.g. collagens, laminins, thrombospondins) when appropriate. Multimers are treated as permanent complexes, referencing EBI identifiers when possible. Human interactions were inferred from non-human homologous interactions when available.
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- Data Repository United States, Netherlands Compatibility:collected from a compatible aggregatorPartners:CMU, NSF, CLARIN, NIDCD Humanities and Social Sciences, Linguistics, HumanitiesCMU,NSF,CLARIN,NIDCD
re3data: r3d100010887
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequenceMing Chen's Lab, Zhejiang University, Hangzhou, China
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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Ocean Gene Atlas(OGA) is a webservice to explore the biogeography of marine genes based on sequence similarity with environmental genomics datasets. OGA is currently implemented with the Tara Ocean Microbiome-Reference Gene Catalog database and the Marine Atlas of Tara Ocean Unigenes. Gene abundance estimates are computed for DNA metagenomes from the smallest Tara Oceans size fractions (from 0 to 3 µm, OM-RGC), and for RNA metatranscriptomes from Tara Oceans larger size fractions (0.8 to 2000µm, MATOU). OGA also includes curated Tara Oceans Eukaryotic Metagenome and Single-Cell Assembled Genomes (MAGs and SAGs), metagenomics-based transcriptomes (MGTs) and metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean (Arctic MAG+G).
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For further information contact us at helpdesk@openaire.eu - Data Repository Netherlands Compatibility:collected from a compatible aggregatorPartners:Netherlands Institute for Sound and Vision Humanities and Social Sciences, Fine Arts, Music, Theatre and Media Studies, Theatre and Media StudiesNetherlands Institute for Sound and Vision
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For further information contact us at helpdesk@openaire.eu - Data Repository Colombia, United States, France Compatibility:Not yet registeredPartners:Alliance of Bioversity and CIAT, CIAT , Harvard Dataverse, CGIAR Life Sciences, Plant Sciences, Agriculture, Forestry, Horticulture and Veterinary MedicineAlliance of Bioversity and CIAT,CIAT ,Harvard Dataverse,CGIAR
re3data: r3d100011880
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For further information contact us at helpdesk@openaire.eu - Data Repository Germany, European Union Compatibility:Not yet registeredPartners:DARIAH-DE, Humanities Data Center Partner, Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek, BMBF, DARIAH-EU Humanities and Social Sciences, Fine Arts, Music, Theatre and Media Studies, HumanitiesDARIAH-DE,Humanities Data Center Partner,Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek,BMBF,DARIAH-EU
The DARIAH-DE repository is a digital long-term archive for human and cultural-scientific research data. Each object described and stored in the DARIAH-DE Repository has a unique and lasting Persistent Identifier (DOI), with which it is permanently referenced, cited, and kept available for the long term. In addition, the DARIAH-DE Repository enables the sustainable and secure archiving of data collections. The DARIAH-DE Repository is not only to DARIAH-DE associated research projects, but also to individual researchers as well as research projects that want to save their research data persistently, referenceable and long-term archived and make it available to third parties. The main focus is the simple and user-oriented access to long-term storage of research data. To ensure its long term sustainability, the DARIAH-DE Repository is operated by the Humanities Data Centre.
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For further information contact us at helpdesk@openaire.eu - Data Repository France Compatibility:Not yet registeredPartners:ICBMS Biology, Protein interactions, carbohydrateICBMS
re3data: r3d100010672
MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations. MatrixDB reports interactions with individual polypeptide chains or with multimers (e.g. collagens, laminins, thrombospondins) when appropriate. Multimers are treated as permanent complexes, referencing EBI identifiers when possible. Human interactions were inferred from non-human homologous interactions when available.
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