1,070 Data sources

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WikiCell
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS Transcriptomics, Expression data
NGDC, CNCB / BIG, CAS
WikiCell provides a wiki interface to information about the human transcriptome and stores information on Expressed Sequenced Tags (ESTs). Users can access, curate, and submit database data as well as browse, query, and up- and download sequences. Gene information is provided, including housekeeping genes, taxonomy location, and gene ontology (GO) description.
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Protein Lysine Modifications Database
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:HUST Biology, protein modification process, post-translational protein modification
HUST
doi: 10.25504/fairsharing.7b2e3b
re3data: r3d100010543
doi: 10.25504/fairsharing.7b2e3b
re3data: r3d100010543
The Protein Lysine Modifications Database (PLMD) is an online data resource specifically designed for protein lysine modifications (PLMs).
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CUHK Digital Repository

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUHK

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NONCODE
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS, IBP Genetics, RNA secondary structure, Expression data
NGDC, CNCB / BIG, CAS,
IBP
doi: 10.25504/fairsharing.hmb1f4
re3data: r3d100012169
doi: 10.25504/fairsharing.hmb1f4
re3data: r3d100012169
NONCODE is a database of noncoding RNAs (except tRNAs and rRNAs), including long noncoding (lnc) RNAs. Information contained within the database includes human lncRNA–disease relationships and single nucleotide polymorphism-lncRNA–disease relationships; human exosome lncRNA expression profiles; and predicted RNA secondary structures of human transcripts. This resource has not been updated since 2017, and therefore its status has been marked as Uncertain. Please get in touch if you have any information about the current status of this resource.
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RNA Atlas of Structure Probing
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:THU Life Science, Comparative Genomics, Genomics
THU
doi: 10.25504/fairsharing.h3pwqc
doi: 10.25504/fairsharing.h3pwqc
RASP (RNA Atlas of Structure Probing) is build from 161 deduplicated transcriptome-wide RNA secondary structures from datasets culled from 38 papers. RASP covers 18 species across animals, plants, bacteria, fungi, and also viruses, and categorizes 18 experimental methods including DMS-seq, SHAPE-Seq, SHAPE-MaP, and icSHAPE, etc. Specially, RASP curates the up-to-date datasets of several RNA secondary structure probing studies for the RNA genome of SARS-CoV-2. RASP also provides a user-friendly interface to query, browse, and visualize RNA structure profiles, offering a shortcut to accessing RNA secondary structures grounded in experimental data.
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Lanzhou University of Technology Institutional Repository
Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Lanzhou University of Finance and Economics, LUT
Lanzhou University of Finance and Economics,
LUT
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Institutional Repository of Institute of Geographic Sciences and Natural Resources Research, CAS

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAS

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Institutional Repository of Tsinghua University

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:THU

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Knowledge Management System of Shanghai Institute of Materia Medica, CAS
Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Knowledge Management System of Shanghai Institute of Materia Medica, CAS
Knowledge Management System of Shanghai Institute of Materia Medica, CAS
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Institutional Repository of Xian Institute of Optics and Precision Mechanics, CAS

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAS

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1,070 Data sources

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WikiCell
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS Transcriptomics, Expression data
NGDC, CNCB / BIG, CAS
WikiCell provides a wiki interface to information about the human transcriptome and stores information on Expressed Sequenced Tags (ESTs). Users can access, curate, and submit database data as well as browse, query, and up- and download sequences. Gene information is provided, including housekeeping genes, taxonomy location, and gene ontology (GO) description.
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Protein Lysine Modifications Database
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:HUST Biology, protein modification process, post-translational protein modification
HUST
doi: 10.25504/fairsharing.7b2e3b
re3data: r3d100010543
doi: 10.25504/fairsharing.7b2e3b
re3data: r3d100010543
The Protein Lysine Modifications Database (PLMD) is an online data resource specifically designed for protein lysine modifications (PLMs).
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CUHK Digital Repository

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUHK

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NONCODE
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS, IBP Genetics, RNA secondary structure, Expression data
NGDC, CNCB / BIG, CAS,
IBP
doi: 10.25504/fairsharing.hmb1f4
re3data: r3d100012169
doi: 10.25504/fairsharing.hmb1f4
re3data: r3d100012169
NONCODE is a database of noncoding RNAs (except tRNAs and rRNAs), including long noncoding (lnc) RNAs. Information contained within the database includes human lncRNA–disease relationships and single nucleotide polymorphism-lncRNA–disease relationships; human exosome lncRNA expression profiles; and predicted RNA secondary structures of human transcripts. This resource has not been updated since 2017, and therefore its status has been marked as Uncertain. Please get in touch if you have any information about the current status of this resource.
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RNA Atlas of Structure Probing
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:THU Life Science, Comparative Genomics, Genomics
THU
doi: 10.25504/fairsharing.h3pwqc
doi: 10.25504/fairsharing.h3pwqc
RASP (RNA Atlas of Structure Probing) is build from 161 deduplicated transcriptome-wide RNA secondary structures from datasets culled from 38 papers. RASP covers 18 species across animals, plants, bacteria, fungi, and also viruses, and categorizes 18 experimental methods including DMS-seq, SHAPE-Seq, SHAPE-MaP, and icSHAPE, etc. Specially, RASP curates the up-to-date datasets of several RNA secondary structure probing studies for the RNA genome of SARS-CoV-2. RASP also provides a user-friendly interface to query, browse, and visualize RNA structure profiles, offering a shortcut to accessing RNA secondary structures grounded in experimental data.
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Lanzhou University of Technology Institutional Repository
Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Lanzhou University of Finance and Economics, LUT
Lanzhou University of Finance and Economics,
LUT
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Institutional Repository of Institute of Geographic Sciences and Natural Resources Research, CAS

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAS

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Institutional Repository of Tsinghua University

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:THU

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Knowledge Management System of Shanghai Institute of Materia Medica, CAS
Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Knowledge Management System of Shanghai Institute of Materia Medica, CAS
Knowledge Management System of Shanghai Institute of Materia Medica, CAS
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Institutional Repository of Xian Institute of Optics and Precision Mechanics, CAS

Institutional Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CAS

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Filters

Country

Type

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Thematic

Jurisdiction

CN
HK

WikiCell

Protein Lysine Modifications Database

CUHK Digital Repository

NONCODE

RNA Atlas of Structure Probing

Lanzhou University of Technology Institutional Repository

Institutional Repository of Institute of Geographic Sciences and Natural Resources Research, CAS

Institutional Repository of Tsinghua University

Knowledge Management System of Shanghai Institute of Materia Medica, CAS

Institutional Repository of Xian Institute of Optics and Precision Mechanics, CAS

WikiCell

Protein Lysine Modifications Database

CUHK Digital Repository

NONCODE

RNA Atlas of Structure Probing

Lanzhou University of Technology Institutional Repository

Institutional Repository of Institute of Geographic Sciences and Natural Resources Research, CAS

Institutional Repository of Tsinghua University

Knowledge Management System of Shanghai Institute of Materia Medica, CAS

Institutional Repository of Xian Institute of Optics and Precision Mechanics, CAS

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