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2,624 Data sources

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  • EuRBPDB is a comprehensive and user-friendly database for classifying and annotating eukaryotic RNA binding proteins (RBPs) drawn from various public databases. Over 100 eukaryotic species such as human, mouse, fly, worm and yeast are included. EuRBPDB also provides information on known and potential cancer-associated RBPs.

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  • MedPortal is a repository for storing Chinese and English ontologies in the biomedical field. Built using the OntoPortal framework, this repository offers ontology search, browsing, sharing, and semantic annotation. It also provides various forms of ontology and terminology reuse through an API.

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  • The Date Palm Resequence Database (DRDB) is an online genomic resource database for date palm. It was created to distinguish different sub-types of date palms and mine genetic variation of interest. The DRDB includes SNPs (single nucleotide polymorphisms) and SSRs (short sequence repeats) from 62 date palm cultivars. Also included are pre-calculated SNPs and SSRs markers for classification and diversity; PCR primers for SNPs and SSRs markers; information on the phylogenetic relationships of all cultivars and their geographic distribution; and coding SNPs and their effects on amino acids.

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  • The European Virus Archive (EVA) project is a comprehensive resource that enhances global virology research by providing access to a vast collection of virus strains, derived material and services. This initiative aims to support the scientific community by facilitating the sharing of high-quality virological materials. EVA serves as a critical infrastructure for public health and research institutions worldwide, enabling rapid response to emerging viral threats and fostering advancements in virology research.

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  • This resource is a collection of all proteins identified to be localized on kinetochore, centrosome, midbody, telomere and spindle from two fungi (S. cerevisiae and S. pombe) and five animals, including C. elegans, D. melanogaster, X. laevis, M. musculus and H. sapiens based on the rationale of "Seeing is believing" (Bloom K et al., 2005). Through ortholog searches, the proteins potentially localized at these sub-cellular regions were detected in 144 eukaryotes. Then the integrated and searchable database MiCroKiTS - Midbody, Centrosome, Kinetochore, Telomere and Spindle has been established. Currently, the MiCroKiTS 4.0 database was updated on Sep. 6, 2014, containing 87,983 unique protein entries.

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  • ModelArchive is the archive for structural models which are not based on experimental data and complements the PDB archive for experimental structures and PDB-Dev for integrative structures. The ModelArchive is being developed following the "Workshop on Applications of Protein Models in Biomedical Research" held at the University of California, San Francisco in July 2008 for applications of protein models in biomedical research. ModelArchive is a repository for depositions of computed models of macromolecular structures which are not based on experimental data. The models can consist of any combination of proteins, RNA, DNA, or carbohydrates and include small molecules bound to them. Deposited models are findable, accessible, interoperable and reusable. Depositions are assigned a DOI to be included in manuscripts for which the model was generated.

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2,624 Data sources
  • more_vert
  • EuRBPDB is a comprehensive and user-friendly database for classifying and annotating eukaryotic RNA binding proteins (RBPs) drawn from various public databases. Over 100 eukaryotic species such as human, mouse, fly, worm and yeast are included. EuRBPDB also provides information on known and potential cancer-associated RBPs.

    more_vert
  • MedPortal is a repository for storing Chinese and English ontologies in the biomedical field. Built using the OntoPortal framework, this repository offers ontology search, browsing, sharing, and semantic annotation. It also provides various forms of ontology and terminology reuse through an API.

    more_vert
  • The Date Palm Resequence Database (DRDB) is an online genomic resource database for date palm. It was created to distinguish different sub-types of date palms and mine genetic variation of interest. The DRDB includes SNPs (single nucleotide polymorphisms) and SSRs (short sequence repeats) from 62 date palm cultivars. Also included are pre-calculated SNPs and SSRs markers for classification and diversity; PCR primers for SNPs and SSRs markers; information on the phylogenetic relationships of all cultivars and their geographic distribution; and coding SNPs and their effects on amino acids.

    more_vert
  • more_vert
  • The European Virus Archive (EVA) project is a comprehensive resource that enhances global virology research by providing access to a vast collection of virus strains, derived material and services. This initiative aims to support the scientific community by facilitating the sharing of high-quality virological materials. EVA serves as a critical infrastructure for public health and research institutions worldwide, enabling rapid response to emerging viral threats and fostering advancements in virology research.

    more_vert
  • more_vert
  • This resource is a collection of all proteins identified to be localized on kinetochore, centrosome, midbody, telomere and spindle from two fungi (S. cerevisiae and S. pombe) and five animals, including C. elegans, D. melanogaster, X. laevis, M. musculus and H. sapiens based on the rationale of "Seeing is believing" (Bloom K et al., 2005). Through ortholog searches, the proteins potentially localized at these sub-cellular regions were detected in 144 eukaryotes. Then the integrated and searchable database MiCroKiTS - Midbody, Centrosome, Kinetochore, Telomere and Spindle has been established. Currently, the MiCroKiTS 4.0 database was updated on Sep. 6, 2014, containing 87,983 unique protein entries.

    more_vert
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  • ModelArchive is the archive for structural models which are not based on experimental data and complements the PDB archive for experimental structures and PDB-Dev for integrative structures. The ModelArchive is being developed following the "Workshop on Applications of Protein Models in Biomedical Research" held at the University of California, San Francisco in July 2008 for applications of protein models in biomedical research. ModelArchive is a repository for depositions of computed models of macromolecular structures which are not based on experimental data. The models can consist of any combination of proteins, RNA, DNA, or carbohydrates and include small molecules bound to them. Deposited models are findable, accessible, interoperable and reusable. Depositions are assigned a DOI to be included in manuscripts for which the model was generated.

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